Variant report
| Variant | rs7770860 |
|---|---|
| Chromosome Location | chr6:131186393-131186394 |
| allele | C/T |
| Outlinks | Ensembl UCSC |
| No. | Chromosome Location | Chromatin state | Cell line | Tissue |
|---|---|---|---|---|
| 1 | chr6:131149400-131213200 | Weak transcription | Pancreas | Pancrea |
| 2 | chr6:131151600-131216600 | Weak transcription | Primary hematopoietic stem cells short term culture | blood |
| 3 | chr6:131158200-131190600 | Weak transcription | Spleen | Spleen |
| 4 | chr6:131158200-131214400 | Weak transcription | Lung | lung |
| 5 | chr6:131159000-131229000 | Weak transcription | Colonic Mucosa | Colon |
| 6 | chr6:131161000-131186600 | Weak transcription | Brain Cingulate Gyrus | brain |
| 7 | chr6:131161800-131186400 | Weak transcription | Ganglion Eminence derived primary cultured neurospheres | brain |
| 8 | chr6:131168400-131190600 | Weak transcription | Duodenum Mucosa | Duodenum |
| 9 | chr6:131168800-131214600 | Weak transcription | Fetal Kidney | kidney |
| 10 | chr6:131170000-131189000 | Strong transcription | Adipose Nuclei | Adipose |
| 11 | chr6:131170400-131193000 | Weak transcription | Fetal Thymus | thymus |
| 12 | chr6:131170400-131217400 | Weak transcription | Psoas Muscle | Psoas |
| 13 | chr6:131170600-131187000 | Weak transcription | Pancreatic Islets | Pancreatic Islet |
| 14 | chr6:131170600-131190400 | Weak transcription | ES-UCSF4 Cell Line | embryonic stem cell |
| 15 | chr6:131170600-131192600 | Weak transcription | Primary hematopoietic stem cells | blood |
| 16 | chr6:131170600-131193000 | Weak transcription | Primary T cells from cord blood | blood |
| 17 | chr6:131170600-131213800 | Weak transcription | GM12878-XiMat | blood |
| 18 | chr6:131170800-131189000 | Strong transcription | Fetal Muscle Trunk | muscle |
| 19 | chr6:131171200-131209600 | Weak transcription | Cortex derived primary cultured neurospheres | brain |
| 20 | chr6:131171200-131223200 | Weak transcription | Right Ventricle | heart |
| 21 | chr6:131171400-131220200 | Weak transcription | Fetal Brain Male | brain |
| 22 | chr6:131172600-131186600 | Weak transcription | Brain Angular Gyrus | brain |
| 23 | chr6:131172800-131189400 | Weak transcription | Brain Inferior Temporal Lobe | brain |
| 24 | chr6:131173000-131207000 | Weak transcription | Brain Substantia Nigra | brain |
| 25 | chr6:131173400-131190800 | Weak transcription | Esophagus | oesophagus |
| 26 | chr6:131175000-131222400 | Weak transcription | Skeletal Muscle Male | skeletal muscle |
| 27 | chr6:131175200-131190600 | Weak transcription | H1 Derived Mesenchymal Stem Cells | ES cell derived |
| 28 | chr6:131175200-131190600 | Weak transcription | Foreskin Fibroblast Primary Cells skin01 | Skin |
| 29 | chr6:131175200-131214000 | Weak transcription | H9 Cell Line | embryonic stem cell |
| 30 | chr6:131175400-131188000 | Strong transcription | Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells | embryonic stem cell |
| 31 | chr6:131175400-131194200 | Weak transcription | iPS DF 6.9 Cell Line | embryonic stem cell |
| 32 | chr6:131175400-131203600 | Weak transcription | A549 | lung |
| 33 | chr6:131175400-131211200 | Weak transcription | Foreskin Fibroblast Primary Cells skin02 | Skin |
| 34 | chr6:131175600-131188200 | Strong transcription | IMR90 fetal lung fibroblasts Cell Line | lung |
| 35 | chr6:131175600-131190400 | Weak transcription | Colon Smooth Muscle | Colon |
| 36 | chr6:131175600-131190600 | Weak transcription | Adipose Derived Mesenchymal Stem Cell Cultured Cells | ES cell derived |
| 37 | chr6:131175600-131205400 | Weak transcription | NH-A | brain |
| 38 | chr6:131175600-131221600 | Weak transcription | Rectal Smooth Muscle | rectum |
| 39 | chr6:131176200-131190800 | Weak transcription | iPS DF 19.11 Cell Line | embryonic stem cell |
| 40 | chr6:131176800-131188400 | Strong transcription | Fetal Lung | lung |
| 41 | chr6:131177200-131209200 | Weak transcription | HUVEC | blood vessel |
| 42 | chr6:131179200-131214000 | Weak transcription | Breast variant Human Mammary Epithelial Cells (vHMEC) | Breast |
| 43 | chr6:131179400-131222400 | Weak transcription | Foreskin Keratinocyte Primary Cells skin03 | Skin |
| 44 | chr6:131179600-131210600 | Weak transcription | NHEK | skin |
| 45 | chr6:131179600-131215000 | Weak transcription | Foreskin Keratinocyte Primary Cells skin02 | Skin |
| 46 | chr6:131180000-131203200 | Weak transcription | Rectal Mucosa Donor 31 | rectum |
| 47 | chr6:131180800-131191600 | Strong transcription | Breast Myoepithelial Primary Cells | Breast |
| 48 | chr6:131181200-131188800 | Strong transcription | Fetal Muscle Leg | muscle |
| 49 | chr6:131181400-131193800 | Weak transcription | H1 BMP4 Derived Trophoblast Cultured Cells | ES cell derived |
| 50 | chr6:131181400-131214400 | Weak transcription | H1 Derived Neuronal Progenitor Cultured Cells | ES cell derived |
