Variant report

Variant	rs7776326
Chromosome Location	chr6:132523515-132523516
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 11 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:10)

rs_ID	r²[population]
rs17061144	1.00[EUR][1000 genomes]
rs6906828	1.00[AMR][1000 genomes]
rs6920767	0.96[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs6925591	0.87[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs717604	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs73779008	1.00[EUR][1000 genomes]
rs73779012	1.00[EUR][1000 genomes]
rs73779020	1.00[EUR][1000 genomes]
rs73779068	1.00[EUR][1000 genomes]
rs7759277	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv2762616	chr6:132404708-132584324	Enhancers Weak transcription Active TSS Flanking Active TSS Bivalent Enhancer ZNF genes & repeats Strong transcription Genic enhancers Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA	22 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:23 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr6:132512000-132523800	Weak transcription	Aorta	Aorta
2	chr6:132519600-132530600	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
3	chr6:132520800-132523600	Weak transcription	Small Intestine	intestine
4	chr6:132521200-132523800	Weak transcription	HSMMtube	muscle
5	chr6:132521400-132523600	Weak transcription	IMR90 fetal lung fibroblasts Cell Line	lung
6	chr6:132521400-132523800	Weak transcription	Foreskin Fibroblast Primary Cells skin02	Skin
7	chr6:132521400-132523800	Weak transcription	Fetal Stomach	stomach
8	chr6:132522600-132525000	Enhancers	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
9	chr6:132522800-132524000	Enhancers	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
10	chr6:132523000-132524600	Enhancers	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
11	chr6:132523000-132524600	Enhancers	Foreskin Fibroblast Primary Cells skin01	Skin
12	chr6:132523000-132524600	Enhancers	Duodenum Smooth Muscle	Duodenum
13	chr6:132523000-132524600	Enhancers	NHDF-Ad	bronchial
14	chr6:132523000-132524800	Enhancers	Fetal Muscle Leg	muscle
15	chr6:132523200-132523600	Weak transcription	NHLF	lung
16	chr6:132523200-132523800	Enhancers	Fetal Intestine Small	intestine
17	chr6:132523200-132524000	Enhancers	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
18	chr6:132523200-132524400	Enhancers	Adipose Nuclei	Adipose
19	chr6:132523200-132524400	Enhancers	HSMM	muscle
20	chr6:132523200-132524400	Enhancers	Osteobl	bone
21	chr6:132523200-132524600	Enhancers	Muscle Satellite Cultured Cells	--
22	chr6:132523400-132524400	Enhancers	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
23	chr6:132523400-132524600	Enhancers	Foreskin Melanocyte Primary Cells skin03	Skin

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