Variant report

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr7:78083986..78086739-chr7:78088245..78090107,2	K562	blood:

rSNPs within LD-proxies of this variant (count:25)

rs_ID	r²[population]
rs10237632	0.86[EUR][1000 genomes]
rs10260177	0.85[EUR][1000 genomes]
rs10270014	0.86[EUR][1000 genomes]
rs1157211	0.86[EUR][1000 genomes]
rs17150823	0.83[EUR][1000 genomes]
rs2302638	0.97[ASN][1000 genomes]
rs2302639	0.97[ASN][1000 genomes]
rs2302640	0.97[ASN][1000 genomes]
rs2302641	0.96[ASN][1000 genomes]
rs4314593	0.83[EUR][1000 genomes]
rs4623346	0.83[EUR][1000 genomes]
rs59370246	0.91[ASN][1000 genomes]
rs59417246	0.99[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs59424961	0.87[EUR][1000 genomes]
rs73148383	0.82[EUR][1000 genomes]
rs73148390	0.99[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs73148393	0.84[EUR][1000 genomes]
rs7786447	0.86[EUR][1000 genomes]
rs7787781	0.85[EUR][1000 genomes]
rs7791794	0.86[EUR][1000 genomes]
rs7798901	0.81[EUR][1000 genomes]
rs7801490	0.96[ASN][1000 genomes]
rs7801864	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7803197	0.86[EUR][1000 genomes]
rs7810530	0.95[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:3 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1022764	chr7:77911072-78316607	Enhancers Weak transcription ZNF genes & repeats Active TSS Flanking Active TSS Strong transcription Bivalent Enhancer Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA	4 gene(s)	inside rSNPs	diseases
2	nsv1022199	chr7:78054639-78469370	Enhancers Weak transcription Active TSS Flanking Active TSS Flanking Bivalent TSS/Enh ZNF genes & repeats Bivalent Enhancer Strong transcription Bivalent/Poised TSS Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA	3 gene(s)	inside rSNPs	diseases
3	nsv538986	chr7:78054639-78469370	Enhancers Flanking Active TSS Weak transcription Active TSS ZNF genes & repeats Flanking Bivalent TSS/Enh Strong transcription Bivalent/Poised TSS Bivalent Enhancer Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA	3 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr7:78083000-78088600	Weak transcription	Brain Substantia Nigra	brain

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