Variant report

Variant	rs7795445
Chromosome Location	chr7:103537073-103537074
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 28 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:27)

rs_ID	r²[population]
rs10254112	0.89[CEU][hapmap];0.85[CHB][hapmap];0.95[YRI][hapmap];0.86[AFR][1000 genomes];0.91[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs10254420	0.83[CEU][hapmap]
rs11761756	0.88[CEU][hapmap];1.00[CHB][hapmap];0.94[YRI][hapmap];0.90[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs12705166	0.94[AFR][1000 genomes];0.93[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs1524802	0.90[AMR][1000 genomes];0.86[EUR][1000 genomes]
rs1541540	0.90[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs2299400	0.82[AMR][1000 genomes];0.85[EUR][1000 genomes]
rs264366	0.93[CEU][hapmap]
rs3857814	0.90[AMR][1000 genomes];0.86[EUR][1000 genomes]
rs3857815	0.90[AMR][1000 genomes];0.86[EUR][1000 genomes]
rs3914123	0.90[AMR][1000 genomes];0.86[EUR][1000 genomes]
rs3914131	0.90[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs3914132	0.88[CEU][hapmap];1.00[CHB][hapmap];0.94[YRI][hapmap];0.90[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs3914133	0.89[CEU][hapmap];0.85[CHB][hapmap];0.92[YRI][hapmap];0.90[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs3915118	0.82[AMR][1000 genomes]
rs4107712	0.90[AMR][1000 genomes];0.86[EUR][1000 genomes]
rs4727577	0.81[AMR][1000 genomes]
rs4727578	0.90[AMR][1000 genomes];0.86[EUR][1000 genomes]
rs6465940	0.90[AMR][1000 genomes];0.84[EUR][1000 genomes]
rs6465943	0.90[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs6465944	0.88[CEU][hapmap];1.00[CHB][hapmap];1.00[YRI][hapmap];0.94[AFR][1000 genomes];0.93[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs6948468	0.84[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs6958221	0.90[AMR][1000 genomes];0.86[EUR][1000 genomes]
rs7357331	0.89[AFR][1000 genomes];0.93[AMR][1000 genomes];0.86[EUR][1000 genomes]
rs7809141	0.92[YRI][hapmap]
rs7811777	1.00[CHB][hapmap]
rs802786	0.83[CEU][hapmap]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv1843940	chr7:103421702-103590285	Weak transcription Enhancers Strong transcription Flanking Active TSS Genic enhancers Active TSS ZNF genes & repeats	Chromatin interactive region	2 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:2 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr7:103531200-103546000	Weak transcription	HepG2	liver
2	chr7:103537000-103543000	Weak transcription	K562	blood

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