Variant report

No.	Distal block	Cell Line	Cell type
1	chr7:103491384..103494332-chr7:103503727..103505342,2	K562	blood:
2	chr7:103501321..103503199-chr7:103503992..103506371,2	K562	blood:
3	chr17:57149242..57149757-chr7:103504514..103505180,2	MCF-7	breast:
4	chr7:103484299..103485806-chr7:103503247..103505483,2	K562	blood:

rSNPs within LD-proxies of this variant (count:29)

rs_ID	r²[population]
rs10254112	0.84[AFR][1000 genomes];0.91[AMR][1000 genomes]
rs11761756	0.87[AMR][1000 genomes]
rs12705166	0.82[AFR][1000 genomes];0.89[AMR][1000 genomes]
rs1524802	0.87[AMR][1000 genomes]
rs1541540	0.87[AMR][1000 genomes]
rs2299400	0.82[AMR][1000 genomes]
rs264361	0.89[AMR][1000 genomes];0.90[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs3857814	0.87[AMR][1000 genomes]
rs3857815	0.87[AMR][1000 genomes]
rs3914123	0.87[AMR][1000 genomes]
rs3914126	0.96[ASN][1000 genomes]
rs3914131	0.87[AMR][1000 genomes]
rs3914132	0.87[AMR][1000 genomes]
rs3914133	0.87[AMR][1000 genomes]
rs39351	0.80[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs39379	0.83[AMR][1000 genomes];0.93[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs39394	0.95[AMR][1000 genomes];0.94[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs39402	0.81[ASN][1000 genomes]
rs39407	0.85[ASN][1000 genomes]
rs4107712	0.87[AMR][1000 genomes]
rs4727577	0.92[AMR][1000 genomes];0.85[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs4727578	0.87[AMR][1000 genomes]
rs6465940	0.87[AMR][1000 genomes]
rs6465943	0.87[AMR][1000 genomes]
rs6465944	0.82[AFR][1000 genomes];0.89[AMR][1000 genomes]
rs6948468	0.82[AMR][1000 genomes]
rs6958221	0.87[AMR][1000 genomes]
rs7357331	0.87[AFR][1000 genomes];0.89[AMR][1000 genomes]
rs7795445	0.82[AMR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv1843940	chr7:103421702-103590285	Weak transcription Enhancers Strong transcription Flanking Active TSS Genic enhancers Active TSS ZNF genes & repeats	Chromatin interactive region	2 gene(s)	inside rSNPs	diseases
2	nsv1030128	chr7:103489028-103517045	Enhancers Weak transcription Strong transcription	Chromatin interactive region	n/a	inside rSNPs	diseases

No data

Chromatin state (count:3 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr7:103498200-103507200	Weak transcription	HepG2	liver
2	chr7:103498200-103519800	Weak transcription	K562	blood
3	chr7:103505000-103507000	Weak transcription	Pancreatic Islets	Pancreatic Islet

Quick Search: