Variant report

Variant	rs7798733
Chromosome Location	chr7:27153281-27153282
allele	C/G/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	STAT3	chr7:27152938-27153310	MCF10A-Er-Src	breast:	n/a	chr7:27153117-27153128 chr7:27153068-27153080
2	RCOR1	chr7:27152952-27153359	K562	blood:	n/a	n/a
3	CHD1	chr7:27152421-27165798	IMR90	lung:	n/a	n/a
4	JUND	chr7:27152834-27153459	A549	lung:	n/a	n/a
5	CHD2	chr7:27152930-27153308	Hela-S3	cervix:	n/a	n/a
6	POLR2A	chr7:27153124-27153434	A549	lung:	n/a	n/a
7	NANOG	chr7:27153086-27153359	H1-hESC	embryonic stem cell:	n/a	n/a
8	SUZ12	chr7:27152090-27153401	NT2-D1	testis:	n/a	n/a
9	POLR2A	chr7:27152966-27153453	Hela-S3	cervix:	n/a	n/a
10	POLR2A	chr7:27152123-27153513	PANC-1	pancreas:	n/a	n/a
11	EP300	chr7:27152730-27153454	A549	lung:	n/a	n/a
12	POLR2A	chr7:27152538-27159551	IMR90	lung:	n/a	n/a
13	POLR2A	chr7:27152822-27153439	MCF10A-Er-Src	breast:	n/a	n/a
14	POLR2A	chr7:27152900-27153431	HCT-116	colon:	n/a	n/a
15	POLR2A	chr7:27152863-27153398	HUVEC	blood vessel:	n/a	n/a
16	POLR2A	chr7:27153015-27153944	Hela-S3	cervix:	n/a	n/a
17	TCF12	chr7:27152419-27154456	A549	lung:	n/a	chr7:27153538-27153548
18	POLR2A	chr7:27153185-27153394	Hela-S3	cervix:	n/a	n/a
19	POLR2A	chr7:27152717-27153602	HUVEC	blood vessel:	n/a	n/a
20	STAT3	chr7:27152889-27153304	MCF10A-Er-Src	breast:	n/a	chr7:27153117-27153128 chr7:27153068-27153080
21	SIN3AK20	chr7:27152570-27153435	PANC-1	pancreas:	n/a	n/a
22	HDAC2	chr7:27153064-27153332	K562	blood:	n/a	n/a
23	CTBP2	chr7:27152651-27153412	H1-hESC	embryonic stem cell:	n/a	n/a
24	NR3C1	chr7:27153162-27153840	A549	lung:	n/a	n/a
25	POLR2A	chr7:27153051-27153575	A549	lung:	n/a	n/a
26	POLR2A	chr7:27153089-27153456	A549	lung:	n/a	n/a
27	POLR2A	chr7:27153050-27153411	Hela-S3	cervix:	n/a	n/a
28	ZBTB7A	chr7:27152855-27153883	ECC-1	luminal epithelium:	n/a	n/a
29	CTCF	chr7:27153180-27153330	HUVEC	blood vessel:	n/a	n/a
30	PBX3	chr7:27152962-27153403	A549	lung:	n/a	n/a
31	YY1	chr7:27152953-27153372	H1-hESC	embryonic stem cell:	n/a	chr7:27153066-27153075 chr7:27153311-27153325
32	SP1	chr7:27152517-27153487	A549	lung:	n/a	chr7:27153062-27153076 chr7:27153056-27153070 chr7:27153065-27153077 chr7:27153067-27153076 chr7:27153067-27153076 chr7:27152667-27152676 chr7:27153066-27153075
33	UBTF	chr7:27153080-27153290	K562	blood:	n/a	n/a
34	POLR2A	chr7:27152636-27153447	HUVEC	blood vessel:	n/a	n/a
35	TAF1	chr7:27153077-27153315	Hela-S3	cervix:	n/a	n/a
36	POLR2A	chr7:27152904-27154071	HUVEC	blood vessel:	n/a	n/a
37	POLR2A	chr7:27152866-27154366	A549	lung:	n/a	n/a
38	TCF7L2	chr7:27152937-27153332	HEK293	kidney:	n/a	n/a
39	POLR2A	chr7:27152922-27153354	HCT-116	colon:	n/a	n/a
40	CCNT2	chr7:27153097-27153364	K562	blood:	n/a	n/a
41	SUZ12	chr7:27152706-27153351	H1-hESC	embryonic stem cell:	n/a	n/a
42	POLR2A	chr7:27152840-27153441	MCF10A-Er-Src	breast:	n/a	n/a
43	REST	chr7:27152824-27153345	A549	lung:	n/a	chr7:27153213-27153223
44	POLR2A	chr7:27153020-27153404	K562	blood:	n/a	n/a
45	EP300	chr7:27152977-27153309	K562	blood:	n/a	n/a
46	TAF1	chr7:27152595-27153507	A549	lung:	n/a	n/a
47	STAT3	chr7:27152657-27153322	MCF10A-Er-Src	breast:	n/a	chr7:27153117-27153128 chr7:27153068-27153080 chr7:27152715-27152723
48	SP1	chr7:27152662-27153476	A549	lung:	n/a	chr7:27153062-27153076 chr7:27153056-27153070 chr7:27153065-27153077 chr7:27153067-27153076 chr7:27153067-27153076 chr7:27152667-27152676 chr7:27153066-27153075
49	POLR2A	chr7:27152987-27154036	HEK293	kidney:	n/a	n/a
50	YY1	chr7:27153069-27153310	K562	blood:	n/a	n/a

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr7:27147212..27149941-chr7:27151391..27153594,2	K562	blood:
2	7:27143270-27156413..7:27162022-27164727	H1-hESC	embryonic stem cell:	embryo

Variant related genes	Relation type
HOXA-AS2	TF binding region
ENSG00000253552	Chromatin interaction

Extended variants
information (count: 93 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:53)

rs_ID	r²[population]
rs10085570	1.00[ASN][1000 genomes]
rs10225507	0.85[ASN][1000 genomes]
rs10238095	0.93[ASN][1000 genomes]
rs10246712	0.93[ASN][1000 genomes]
rs11564055	0.98[AFR][1000 genomes];0.88[AMR][1000 genomes];0.96[ASN][1000 genomes]
rs11762730	0.90[ASN][1000 genomes]
rs11983200	0.84[AMR][1000 genomes];0.83[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs12530948	0.93[ASN][1000 genomes]
rs12533947	0.98[ASN][1000 genomes]
rs12666919	0.93[ASN][1000 genomes]
rs12666926	0.93[ASN][1000 genomes]
rs1548497	0.89[AMR][1000 genomes];0.89[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs1725074	0.91[ASN][1000 genomes]
rs17449108	0.95[ASN][1000 genomes]
rs17471485	0.95[ASN][1000 genomes]
rs17471520	0.90[AMR][1000 genomes];0.89[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs1801085	0.90[AMR][1000 genomes];0.92[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs1859166	0.97[ASN][1000 genomes]
rs2107063	0.97[ASN][1000 genomes]
rs2285722	0.97[ASN][1000 genomes]
rs2301720	0.93[ASN][1000 genomes]
rs2301721	0.81[ASN][1000 genomes]
rs2428432	0.93[ASN][1000 genomes]
rs2428433	0.98[AFR][1000 genomes];0.88[AMR][1000 genomes];0.96[ASN][1000 genomes]
rs2428434	0.98[AFR][1000 genomes];0.88[AMR][1000 genomes];0.97[ASN][1000 genomes]
rs2465275	0.88[AMR][1000 genomes];0.93[ASN][1000 genomes]
rs2465276	0.84[AMR][1000 genomes];0.97[ASN][1000 genomes]
rs3735530	0.93[ASN][1000 genomes]
rs3801320	0.97[ASN][1000 genomes]
rs3823764	0.86[ASN][1000 genomes]
rs4722657	1.00[ASN][1000 genomes]
rs4722659	0.97[ASN][1000 genomes]
rs4722666	0.89[ASN][1000 genomes]
rs61384251	0.84[AMR][1000 genomes];0.97[ASN][1000 genomes]
rs6461985	1.00[AFR][1000 genomes];0.98[AMR][1000 genomes];0.93[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs6461987	0.90[AMR][1000 genomes];0.92[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs68021164	0.90[ASN][1000 genomes]
rs6948297	0.95[AMR][1000 genomes];0.93[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs6957209	0.92[AMR][1000 genomes];0.92[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs6962314	0.90[AMR][1000 genomes];0.87[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs6969780	0.82[AFR][1000 genomes];0.90[AMR][1000 genomes];0.93[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs6973182	0.89[AMR][1000 genomes];0.89[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs6976129	0.88[AMR][1000 genomes];0.89[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs73071548	0.93[AMR][1000 genomes];0.93[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs73071550	0.99[AFR][1000 genomes];0.98[AMR][1000 genomes];0.93[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7341470	0.96[ASN][1000 genomes]
rs739734	0.90[AMR][1000 genomes];0.93[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs875898	0.93[ASN][1000 genomes]
rs886339	0.93[ASN][1000 genomes]
rs929249	0.90[AMR][1000 genomes];0.92[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs983184	0.93[ASN][1000 genomes]
rs983185	0.93[ASN][1000 genomes]
rs985652	0.91[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:40 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1025538	chr7:26482342-27376045	Enhancers Bivalent/Poised TSS Weak transcription Flanking Bivalent TSS/Enh Bivalent Enhancer Flanking Active TSS Transcr. at gene 5' and 3' Active TSS Genic enhancers Strong transcription ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	213 gene(s)	inside rSNPs	diseases
2	nsv538805	chr7:26482342-27376045	Bivalent/Poised TSS Flanking Bivalent TSS/Enh Enhancers Bivalent Enhancer Active TSS Strong transcription Flanking Active TSS Genic enhancers Weak transcription Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	213 gene(s)	inside rSNPs	diseases
3	nsv1018709	chr7:26990384-27216552	Bivalent Enhancer Enhancers Weak transcription Bivalent/Poised TSS Flanking Bivalent TSS/Enh Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Genic enhancers Strong transcription ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	140 gene(s)	inside rSNPs	diseases
4	nsv538806	chr7:26990384-27216552	Bivalent Enhancer Flanking Active TSS Bivalent/Poised TSS Flanking Bivalent TSS/Enh Enhancers Genic enhancers Active TSS Weak transcription Transcr. at gene 5' and 3' Strong transcription ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	140 gene(s)	inside rSNPs	diseases
5	nsv887856	chr7:27073731-27297791	Flanking Bivalent TSS/Enh Active TSS Bivalent/Poised TSS Flanking Active TSS Bivalent Enhancer Enhancers Weak transcription Transcr. at gene 5' and 3' ZNF genes & repeats Genic enhancers Strong transcription	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	183 gene(s)	inside rSNPs	diseases
6	nsv824038	chr7:27119294-27284522	Flanking Bivalent TSS/Enh Bivalent Enhancer Flanking Active TSS Bivalent/Poised TSS Enhancers Weak transcription Active TSS Transcr. at gene 5' and 3' Genic enhancers Strong transcription ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	183 gene(s)	inside rSNPs	diseases
7	nsv887857	chr7:27120689-27229549	Bivalent Enhancer Flanking Active TSS Active TSS Enhancers Bivalent/Poised TSS Weak transcription Flanking Bivalent TSS/Enh Genic enhancers Transcr. at gene 5' and 3' Strong transcription ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	176 gene(s)	inside rSNPs	diseases
8	nsv824039	chr7:27121825-27294951	Bivalent Enhancer Active TSS Flanking Active TSS Flanking Bivalent TSS/Enh Enhancers Bivalent/Poised TSS Transcr. at gene 5' and 3' Weak transcription Genic enhancers Strong transcription ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	183 gene(s)	inside rSNPs	diseases
9	nsv824040	chr7:27121870-27295010	Flanking Active TSS Enhancers Flanking Bivalent TSS/Enh Bivalent Enhancer Bivalent/Poised TSS Weak transcription Transcr. at gene 5' and 3' Active TSS Genic enhancers Strong transcription ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	183 gene(s)	inside rSNPs	diseases
10	nsv887858	chr7:27127231-27188659	Bivalent/Poised TSS Flanking Bivalent TSS/Enh Bivalent Enhancer Active TSS Flanking Active TSS Weak transcription Enhancers ZNF genes & repeats Genic enhancers Strong transcription Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	57 gene(s)	inside rSNPs	diseases
11	nsv887860	chr7:27127231-27196069	Weak transcription Active TSS Flanking Active TSS Enhancers Flanking Bivalent TSS/Enh Bivalent Enhancer Bivalent/Poised TSS Strong transcription Transcr. at gene 5' and 3' Genic enhancers ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	66 gene(s)	inside rSNPs	diseases
12	nsv887859	chr7:27127231-27196113	Bivalent Enhancer Flanking Active TSS Weak transcription Bivalent/Poised TSS Enhancers Active TSS Flanking Bivalent TSS/Enh Genic enhancers Transcr. at gene 5' and 3' Strong transcription ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	66 gene(s)	inside rSNPs	diseases
13	nsv887861	chr7:27127231-27206688	Enhancers Bivalent Enhancer Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Flanking Active TSS Bivalent/Poised TSS Active TSS Weak transcription Strong transcription Genic enhancers ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	75 gene(s)	inside rSNPs	diseases
14	nsv887862	chr7:27127231-27217359	Bivalent Enhancer Flanking Bivalent TSS/Enh Active TSS Flanking Active TSS Enhancers Strong transcription Bivalent/Poised TSS Genic enhancers Weak transcription Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	141 gene(s)	inside rSNPs	diseases
15	nsv887863	chr7:27127231-27243106	Active TSS Weak transcription Transcr. at gene 5' and 3' Enhancers Flanking Active TSS Flanking Bivalent TSS/Enh Bivalent Enhancer Bivalent/Poised TSS Genic enhancers Strong transcription ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	181 gene(s)	inside rSNPs	diseases
16	nsv887864	chr7:27127231-27243962	Bivalent Enhancer Enhancers Weak transcription Bivalent/Poised TSS Genic enhancers Flanking Bivalent TSS/Enh Flanking Active TSS Transcr. at gene 5' and 3' Active TSS Strong transcription ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	181 gene(s)	inside rSNPs	diseases
17	nsv887865	chr7:27127231-27247279	Bivalent Enhancer Flanking Bivalent TSS/Enh Weak transcription Bivalent/Poised TSS Enhancers Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Genic enhancers Strong transcription ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	181 gene(s)	inside rSNPs	diseases
18	nsv887866	chr7:27127231-27248373	Bivalent/Poised TSS Enhancers Bivalent Enhancer Active TSS Flanking Active TSS Weak transcription Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Strong transcription Genic enhancers ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	181 gene(s)	inside rSNPs	diseases
19	nsv887867	chr7:27127231-27252246	Enhancers Bivalent Enhancer Flanking Active TSS Flanking Bivalent TSS/Enh Active TSS Bivalent/Poised TSS Weak transcription Transcr. at gene 5' and 3' Genic enhancers ZNF genes & repeats Strong transcription	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	181 gene(s)	inside rSNPs	diseases
20	nsv824041	chr7:27128039-27294951	Flanking Bivalent TSS/Enh Active TSS Weak transcription Bivalent/Poised TSS Bivalent Enhancer Enhancers Flanking Active TSS Strong transcription Transcr. at gene 5' and 3' Genic enhancers ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	183 gene(s)	inside rSNPs	diseases
21	nsv606463	chr7:27135314-27182245	Active TSS Enhancers Genic enhancers Bivalent/Poised TSS Flanking Active TSS ZNF genes & repeats Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Weak transcription Bivalent Enhancer Strong transcription	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	54 gene(s)	inside rSNPs	diseases
22	nsv887868	chr7:27135314-27202289	Bivalent Enhancer Flanking Active TSS Flanking Bivalent TSS/Enh Enhancers Bivalent/Poised TSS Active TSS Transcr. at gene 5' and 3' Weak transcription Genic enhancers Strong transcription ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	66 gene(s)	inside rSNPs	diseases
23	nsv887869	chr7:27135314-27297791	Bivalent Enhancer Flanking Bivalent TSS/Enh Flanking Active TSS Active TSS Enhancers Bivalent/Poised TSS Transcr. at gene 5' and 3' Weak transcription Strong transcription Genic enhancers ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	181 gene(s)	inside rSNPs	diseases
24	nsv887870	chr7:27136308-27154737	Active TSS Transcr. at gene 5' and 3' Flanking Active TSS Flanking Bivalent TSS/Enh Bivalent Enhancer Enhancers Weak transcription Bivalent/Poised TSS Genic enhancers Strong transcription ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	13 gene(s)	inside rSNPs	diseases
25	nsv887871	chr7:27136308-27179814	Weak transcription Bivalent Enhancer Enhancers Flanking Active TSS Flanking Bivalent TSS/Enh Bivalent/Poised TSS Active TSS Genic enhancers Transcr. at gene 5' and 3' Strong transcription ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	53 gene(s)	inside rSNPs	diseases
26	nsv887872	chr7:27136308-27181437	Bivalent Enhancer Flanking Bivalent TSS/Enh Flanking Active TSS Bivalent/Poised TSS Enhancers Weak transcription Active TSS Genic enhancers Transcr. at gene 5' and 3' Strong transcription ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	54 gene(s)	inside rSNPs	diseases
27	nsv887873	chr7:27136308-27186495	Bivalent/Poised TSS Weak transcription Flanking Active TSS Active TSS Bivalent Enhancer Enhancers Genic enhancers Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Strong transcription ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	54 gene(s)	inside rSNPs	diseases
28	nsv887874	chr7:27136308-27196069	Bivalent/Poised TSS Active TSS Flanking Active TSS Enhancers Weak transcription Flanking Bivalent TSS/Enh Bivalent Enhancer Transcr. at gene 5' and 3' ZNF genes & repeats Genic enhancers Strong transcription	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	64 gene(s)	inside rSNPs	diseases
29	nsv606464	chr7:27138478-27168590	Enhancers ZNF genes & repeats Active TSS Flanking Active TSS Bivalent Enhancer Genic enhancers Transcr. at gene 5' and 3' Weak transcription Flanking Bivalent TSS/Enh Strong transcription Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	45 gene(s)	inside rSNPs	diseases
30	nsv1020608	chr7:27139892-27324004	Bivalent Enhancer Active TSS Enhancers Transcr. at gene 5' and 3' Flanking Active TSS Flanking Bivalent TSS/Enh Bivalent/Poised TSS Weak transcription Genic enhancers Strong transcription ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	182 gene(s)	inside rSNPs	diseases
31	nsv538807	chr7:27139892-27324004	Flanking Bivalent TSS/Enh Bivalent Enhancer Weak transcription Active TSS Bivalent/Poised TSS Flanking Active TSS Enhancers Transcr. at gene 5' and 3' Strong transcription Genic enhancers ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	182 gene(s)	inside rSNPs	diseases
32	nsv1033316	chr7:27140645-27237951	Bivalent Enhancer Active TSS Flanking Bivalent TSS/Enh Weak transcription Enhancers Flanking Active TSS Bivalent/Poised TSS Transcr. at gene 5' and 3' Strong transcription ZNF genes & repeats Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	178 gene(s)	inside rSNPs	diseases
33	nsv606465	chr7:27143757-27229549	Bivalent Enhancer Flanking Bivalent TSS/Enh Active TSS Weak transcription Enhancers Transcr. at gene 5' and 3' Bivalent/Poised TSS Flanking Active TSS Genic enhancers Strong transcription ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	174 gene(s)	inside rSNPs	diseases
34	nsv606466	chr7:27145024-27197319	Bivalent/Poised TSS Flanking Active TSS Active TSS Enhancers Bivalent Enhancer Weak transcription Flanking Bivalent TSS/Enh Genic enhancers Transcr. at gene 5' and 3' Strong transcription ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	64 gene(s)	inside rSNPs	diseases
35	nsv606467	chr7:27145100-27196113	Active TSS Enhancers Flanking Active TSS Bivalent/Poised TSS Bivalent Enhancer Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Weak transcription Strong transcription Genic enhancers ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	64 gene(s)	inside rSNPs	diseases
36	nsv887875	chr7:27145100-27243962	Active TSS ZNF genes & repeats Bivalent/Poised TSS Flanking Bivalent TSS/Enh Bivalent Enhancer Enhancers Flanking Active TSS Weak transcription Strong transcription Transcr. at gene 5' and 3' Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	179 gene(s)	inside rSNPs	diseases
37	nsv532118	chr7:27146920-27354205	Flanking Active TSS Bivalent Enhancer Enhancers Transcr. at gene 5' and 3' Bivalent/Poised TSS Flanking Bivalent TSS/Enh Active TSS Weak transcription Genic enhancers Strong transcription ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	182 gene(s)	inside rSNPs	diseases
38	esv3409585	chr7:27152452-27155000	Flanking Bivalent TSS/Enh Active TSS Enhancers Weak transcription Flanking Active TSS Bivalent Enhancer Bivalent/Poised TSS Strong transcription Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	6 gene(s)	inside rSNPs	diseases
39	nsv5674	chr7:27152562-27197341	Bivalent Enhancer Weak transcription Active TSS Flanking Bivalent TSS/Enh Enhancers Genic enhancers Strong transcription Bivalent/Poised TSS Flanking Active TSS Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	63 gene(s)	inside rSNPs	diseases
40	esv3369283	chr7:27152827-27154725	Bivalent/Poised TSS Flanking Bivalent TSS/Enh Flanking Active TSS Active TSS Enhancers Weak transcription Transcr. at gene 5' and 3' Bivalent Enhancer Strong transcription	TF binding region CpG island Chromatin interactive region lncRNA	4 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:80 , 50 per page) page: 1 2

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr7:27145800-27162800	Strong transcription	Primary hematopoietic stem cells short term culture	blood
2	chr7:27146400-27169600	Strong transcription	Primary hematopoietic stem cells G-CSF-mobilized Male	--
3	chr7:27146800-27159000	Weak transcription	Primary hematopoietic stem cells	blood
4	chr7:27150000-27153400	Flanking Active TSS	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
5	chr7:27150000-27158400	Active TSS	Aorta	Aorta
6	chr7:27150400-27154600	Bivalent/Poised TSS	NH-A	brain
7	chr7:27151000-27158200	Active TSS	Breast Myoepithelial Primary Cells	Breast
8	chr7:27151400-27154000	Active TSS	Fetal Stomach	stomach
9	chr7:27151400-27155000	Weak transcription	HepG2	liver
10	chr7:27151600-27154000	Active TSS	NHLF	lung
11	chr7:27151600-27156000	Active TSS	Fetal Kidney	kidney
12	chr7:27151600-27156800	Bivalent/Poised TSS	Fetal Lung	lung
13	chr7:27151600-27159200	Active TSS	Duodenum Smooth Muscle	Duodenum
14	chr7:27151800-27153800	Active TSS	HMEC	breast
15	chr7:27151800-27157000	Active TSS	Right Atrium	heart
16	chr7:27152000-27154000	Active TSS	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
17	chr7:27152000-27154000	Active TSS	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
18	chr7:27152200-27154000	Active TSS	Placenta Amnion	Placenta Amnion
19	chr7:27152200-27154000	Active TSS	A549	lung
20	chr7:27152400-27153800	Bivalent/Poised TSS	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
21	chr7:27152600-27153800	Active TSS	Skeletal Muscle Female	skeletal muscle
22	chr7:27152600-27154000	Active TSS	Stomach Mucosa	stomach
23	chr7:27152600-27154000	Active TSS	HSMM	muscle
24	chr7:27152600-27154600	Bivalent Enhancer	ES-UCSF4 Cell Line	embryonic stem cell
25	chr7:27152600-27154800	Active TSS	Fetal Muscle Trunk	muscle
26	chr7:27152600-27157800	Active TSS	H1 Derived Mesenchymal Stem Cells	ES cell derived
27	chr7:27152600-27158000	Active TSS	Esophagus	oesophagus
28	chr7:27152800-27153400	Bivalent Enhancer	H1 Cell Line	embryonic stem cell
29	chr7:27152800-27153400	Flanking Bivalent TSS/Enh	Foreskin Fibroblast Primary Cells skin02	Skin
30	chr7:27152800-27153400	Flanking Active TSS	Foreskin Melanocyte Primary Cells skin03	Skin
31	chr7:27152800-27153400	Active TSS	Gastric	stomach
32	chr7:27152800-27153400	Enhancers	Pancreas	Pancrea
33	chr7:27152800-27153600	Active TSS	Ovary	ovary
34	chr7:27152800-27153600	Active TSS	Sigmoid Colon	Sigmoid Colon
35	chr7:27152800-27153800	Active TSS	Small Intestine	intestine
36	chr7:27152800-27154000	Active TSS	HSMMtube	muscle
37	chr7:27152800-27154200	Active TSS	Thymus	Thymus
38	chr7:27152800-27156800	Active TSS	Lung	lung
39	chr7:27152800-27169400	Strong transcription	Primary hematopoietic stem cells G-CSF-mobilized Female	--
40	chr7:27153000-27153400	Bivalent/Poised TSS	ES-WA7 Cell Line	embryonic stem cell
41	chr7:27153000-27153400	Bivalent/Poised TSS	HUES48 Cell Line	embryonic stem cell
42	chr7:27153000-27153400	Bivalent/Poised TSS	iPS-18 Cell Line	embryonic stem cell
43	chr7:27153000-27153400	Flanking Bivalent TSS/Enh	iPS DF 6.9 Cell Line	embryonic stem cell
44	chr7:27153000-27153400	Flanking Bivalent TSS/Enh	Foreskin Fibroblast Primary Cells skin01	Skin
45	chr7:27153000-27153400	Bivalent/Poised TSS	Fetal Adrenal Gland	Adrenal Gland
46	chr7:27153000-27153400	Flanking Active TSS	Right Ventricle	heart
47	chr7:27153000-27153600	Active TSS	Spleen	Spleen
48	chr7:27153000-27153800	Active TSS	IMR90 fetal lung fibroblasts Cell Line	lung
49	chr7:27153000-27153800	Active TSS	Foreskin Keratinocyte Primary Cells skin02	Skin
50	chr7:27153000-27153800	Active TSS	Foreskin Keratinocyte Primary Cells skin03	Skin

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