Variant report

Variant rs17471485
Chromosome Location chr7:27172167-27172168
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:49 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr7:27171200-27173000 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
2 chr7:27171200-27173000 Enhancers Breast Myoepithelial Primary Cells Breast
3 chr7:27171200-27173000 Enhancers HepG2 liver
4 chr7:27171200-27173200 Weak transcription HMEC breast
5 chr7:27171200-27174000 Genic enhancers Primary hematopoietic stem cells G-CSF-mobilized Male --
6 chr7:27171200-27175400 Enhancers NHLF lung
7 chr7:27171200-27175600 Enhancers Fetal Stomach stomach
8 chr7:27171200-27175800 Enhancers Fetal Intestine Large intestine
9 chr7:27171200-27176400 Weak transcription Lung lung
10 chr7:27171200-27181400 Weak transcription Esophagus oesophagus
11 chr7:27171400-27172200 Enhancers Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
12 chr7:27171400-27172600 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
13 chr7:27171400-27172600 Bivalent Enhancer Fetal Lung lung
14 chr7:27171400-27172800 Weak transcription Fetal Muscle Trunk muscle
15 chr7:27171400-27173000 Weak transcription Adipose Nuclei Adipose
16 chr7:27171400-27173000 Weak transcription Colonic Mucosa Colon
17 chr7:27171400-27173000 Weak transcription Psoas Muscle Psoas
18 chr7:27171400-27173000 Weak transcription Stomach Mucosa stomach
19 chr7:27171400-27173200 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
20 chr7:27171400-27173200 Enhancers Rectal Mucosa Donor 31 rectum
21 chr7:27171400-27173400 Weak transcription Muscle Satellite Cultured Cells --
22 chr7:27171400-27173400 Weak transcription Sigmoid Colon Sigmoid Colon
23 chr7:27171400-27173400 Weak transcription HSMM muscle
24 chr7:27171400-27174800 Enhancers Rectal Smooth Muscle rectum
25 chr7:27171400-27175200 Enhancers A549 lung
26 chr7:27171400-27175400 Enhancers Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
27 chr7:27171400-27175800 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
28 chr7:27171400-27175800 Weak transcription HSMMtube muscle
29 chr7:27171600-27172600 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
30 chr7:27171600-27172600 Weak transcription Rectal Mucosa Donor 29 rectum
31 chr7:27171600-27173000 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
32 chr7:27171600-27173000 Weak transcription Fetal Adrenal Gland Adrenal Gland
33 chr7:27171600-27173000 Weak transcription Fetal Muscle Leg muscle
34 chr7:27171600-27173000 Weak transcription Skeletal Muscle Male skeletal muscle
35 chr7:27171600-27173000 Weak transcription Skeletal Muscle Female skeletal muscle
36 chr7:27171600-27173000 Enhancers Stomach Smooth Muscle stomach
37 chr7:27171600-27173000 Enhancers HUVEC blood vessel
38 chr7:27171600-27173000 Weak transcription NHEK skin
39 chr7:27171600-27173400 Weak transcription Osteobl bone
40 chr7:27171600-27173600 Weak transcription Primary hematopoietic stem cells blood
41 chr7:27171600-27173600 Enhancers Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
42 chr7:27171600-27173800 Strong transcription Primary hematopoietic stem cells short term culture blood
43 chr7:27171600-27173800 Weak transcription NHDF-Ad bronchial
44 chr7:27171800-27172200 Weak transcription Fetal Intestine Small intestine
45 chr7:27171800-27173200 Enhancers Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
46 chr7:27172000-27172200 Flanking Active TSS Fetal Kidney kidney
47 chr7:27172000-27172400 Weak transcription Colon Smooth Muscle Colon
48 chr7:27172000-27173000 Weak transcription Duodenum Smooth Muscle Duodenum
49 chr7:27172000-27173800 Genic enhancers Primary hematopoietic stem cells G-CSF-mobilized Female --

Quick Search:


  
Input of quick search could be:

what's new

Quick links