Variant report

Variant rs985652
Chromosome Location chr7:27198083-27198084
allele A/C
Outlinks Ensembl   UCSC
Chromatin state (count:59 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr7:27186800-27202600 Flanking Active TSS Primary hematopoietic stem cells G-CSF-mobilized Female --
2 chr7:27193400-27200400 Flanking Active TSS Primary hematopoietic stem cells blood
3 chr7:27193600-27198600 Active TSS Fetal Kidney kidney
4 chr7:27195200-27198400 Bivalent/Poised TSS Small Intestine intestine
5 chr7:27195400-27198400 Active TSS Rectal Mucosa Donor 31 rectum
6 chr7:27195400-27198600 ZNF genes & repeats H1 Derived Mesenchymal Stem Cells ES cell derived
7 chr7:27195400-27199600 Active TSS Colonic Mucosa Colon
8 chr7:27195400-27203200 Active TSS Rectal Smooth Muscle rectum
9 chr7:27195600-27200600 Flanking Active TSS Primary hematopoietic stem cells short term culture blood
10 chr7:27196200-27198400 Bivalent Enhancer Primary T regulatory cells fromperipheralblood blood
11 chr7:27196200-27198600 Bivalent Enhancer Primary T cells fromperipheralblood blood
12 chr7:27196400-27198400 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
13 chr7:27196400-27198600 Bivalent Enhancer Fetal Thymus thymus
14 chr7:27196400-27199800 Bivalent Enhancer Primary Natural Killer cells fromperipheralblood blood
15 chr7:27196400-27199800 Weak transcription Pancreas Pancrea
16 chr7:27196600-27198200 Weak transcription Right Atrium heart
17 chr7:27196600-27198400 Flanking Active TSS Foreskin Keratinocyte Primary Cells skin03 Skin
18 chr7:27196600-27199600 Weak transcription A549 lung
19 chr7:27196600-27200600 Flanking Active TSS Primary hematopoietic stem cells G-CSF-mobilized Male --
20 chr7:27196600-27201000 Flanking Active TSS HUVEC blood vessel
21 chr7:27196800-27198400 Bivalent Enhancer ES-UCSF4 Cell Line embryonic stem cell
22 chr7:27196800-27198400 Bivalent/Poised TSS Fetal Intestine Small intestine
23 chr7:27196800-27199600 Bivalent Enhancer Primary T helper cells PMA-I stimulated --
24 chr7:27196800-27199600 Weak transcription Osteobl bone
25 chr7:27196800-27199800 Weak transcription HSMM muscle
26 chr7:27196800-27200000 Weak transcription HSMMtube muscle
27 chr7:27197000-27198400 Weak transcription Muscle Satellite Cultured Cells --
28 chr7:27197000-27199200 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
29 chr7:27197000-27199200 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
30 chr7:27197000-27199600 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
31 chr7:27197000-27199600 Weak transcription Skeletal Muscle Male skeletal muscle
32 chr7:27197000-27199600 Weak transcription Skeletal Muscle Female skeletal muscle
33 chr7:27197000-27199800 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
34 chr7:27197000-27200200 Weak transcription NHLF lung
35 chr7:27197200-27198400 Bivalent Enhancer Thymus Thymus
36 chr7:27197200-27199600 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
37 chr7:27197200-27199600 Weak transcription Adipose Nuclei Adipose
38 chr7:27197200-27199600 Weak transcription Dnd41 blood
39 chr7:27197200-27199800 Weak transcription Psoas Muscle Psoas
40 chr7:27197200-27200000 Weak transcription Colon Smooth Muscle Colon
41 chr7:27197200-27200000 Weak transcription NHDF-Ad bronchial
42 chr7:27197400-27198400 Bivalent Enhancer Primary T helper 17 cells PMA-I stimulated --
43 chr7:27197400-27198400 Bivalent Enhancer Foreskin Fibroblast Primary Cells skin01 Skin
44 chr7:27197400-27199600 Bivalent Enhancer Primary T helper naive cells fromperipheralblood blood
45 chr7:27197600-27198200 Active TSS Foreskin Keratinocyte Primary Cells skin02 Skin
46 chr7:27197600-27198400 Bivalent Enhancer Primary T cells from cord blood blood
47 chr7:27197600-27198800 Bivalent Enhancer Primary T helper naive cells from peripheral blood blood
48 chr7:27197600-27201400 Active TSS Breast Myoepithelial Primary Cells Breast
49 chr7:27197800-27198400 Bivalent Enhancer iPS DF 19.11 Cell Line embryonic stem cell
50 chr7:27197800-27198800 Bivalent Enhancer Primary T cells effector/memory enriched fromperipheralblood blood

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