Variant report

Variant rs781985
Chromosome Location chr6:71379934-71379935
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:107 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr6:71377200-71380600 Active TSS GM12878-XiMat blood
2 chr6:71377200-71381600 Active TSS hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
3 chr6:71377400-71380000 Active TSS Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
4 chr6:71378200-71380000 Flanking Active TSS Primary T helper cells PMA-I stimulated --
5 chr6:71378200-71380200 Flanking Active TSS Primary T cells from cord blood blood
6 chr6:71378400-71380600 Weak transcription Pancreas Pancrea
7 chr6:71378400-71381000 Weak transcription Gastric stomach
8 chr6:71378400-71382400 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
9 chr6:71378400-71382400 Weak transcription Esophagus oesophagus
10 chr6:71378400-71382400 Weak transcription Lung lung
11 chr6:71378400-71382600 Weak transcription Spleen Spleen
12 chr6:71378400-71382800 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
13 chr6:71378600-71380000 Enhancers Primary monocytes fromperipheralblood blood
14 chr6:71378600-71380600 Weak transcription Left Ventricle heart
15 chr6:71378600-71380800 Enhancers Primary neutrophils fromperipheralblood blood
16 chr6:71378600-71381200 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
17 chr6:71378600-71382800 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
18 chr6:71378600-71383200 Weak transcription Primary Natural Killer cells fromperipheralblood blood
19 chr6:71378600-71383400 Weak transcription Aorta Aorta
20 chr6:71378600-71386600 Weak transcription Ovary ovary
21 chr6:71378800-71380000 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Female --
22 chr6:71378800-71380600 Weak transcription Primary T cells fromperipheralblood blood
23 chr6:71378800-71380800 Enhancers Primary T killer naive cells fromperipheralblood blood
24 chr6:71378800-71381600 Enhancers Primary T cells effector/memory enriched fromperipheralblood blood
25 chr6:71378800-71381800 Weak transcription Stomach Mucosa stomach
26 chr6:71378800-71382600 Weak transcription H9 Cell Line embryonic stem cell
27 chr6:71378800-71382800 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
28 chr6:71378800-71383000 Weak transcription ES-WA7 Cell Line embryonic stem cell
29 chr6:71379000-71380000 Enhancers H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
30 chr6:71379000-71382000 Weak transcription K562 blood
31 chr6:71379000-71382400 Weak transcription Fetal Thymus thymus
32 chr6:71379000-71382600 Weak transcription HUES48 Cell Line embryonic stem cell
33 chr6:71379000-71383600 Enhancers Primary T helper memory cells from peripheral blood 1 blood
34 chr6:71379000-71383600 Enhancers Small Intestine intestine
35 chr6:71379200-71380000 Enhancers Cortex derived primary cultured neurospheres brain
36 chr6:71379200-71380600 Enhancers Primary T regulatory cells fromperipheralblood blood
37 chr6:71379200-71380600 Weak transcription Thymus Thymus
38 chr6:71379200-71381200 Enhancers Liver Liver
39 chr6:71379200-71382200 Weak transcription HUES6 Cell Line embryonic stem cell
40 chr6:71379200-71382200 Weak transcription Fetal Muscle Leg muscle
41 chr6:71379200-71382400 Weak transcription Brain Substantia Nigra brain
42 chr6:71379200-71382600 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
43 chr6:71379200-71382600 Weak transcription NHDF-Ad bronchial
44 chr6:71379200-71382800 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
45 chr6:71379200-71382800 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
46 chr6:71379200-71382800 Weak transcription HSMMtube muscle
47 chr6:71379200-71383200 Enhancers Primary T helper naive cells fromperipheralblood blood
48 chr6:71379200-71383200 Enhancers Primary T helper cells fromperipheralblood blood
49 chr6:71379200-71384000 Enhancers Primary T helper memory cells from peripheral blood 2 blood
50 chr6:71379200-71386200 Enhancers Primary T helper 17 cells PMA-I stimulated --

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