The 2.0 version of rSNPBase

Variant report

Variant rs9455220
Chromosome Location chr6:71474124-71474125
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:79 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr6:71428200-71476400 Weak transcription Primary T killer memory cells from peripheral blood blood
2 chr6:71435800-71477600 Weak transcription HSMM muscle
3 chr6:71439600-71474800 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
4 chr6:71440400-71488800 Weak transcription Skeletal Muscle Male skeletal muscle
5 chr6:71441800-71474200 Weak transcription Breast Myoepithelial Primary Cells Breast
6 chr6:71443200-71488800 Weak transcription Primary T helper naive cells fromperipheralblood blood
7 chr6:71444800-71523600 Weak transcription Skeletal Muscle Female skeletal muscle
8 chr6:71445200-71482200 Weak transcription Primary T regulatory cells fromperipheralblood blood
9 chr6:71447800-71500600 Weak transcription Brain Cingulate Gyrus brain
10 chr6:71451400-71483200 Weak transcription Brain Inferior Temporal Lobe brain
11 chr6:71451800-71474800 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
12 chr6:71451800-71480200 Weak transcription Primary mononuclear cells fromperipheralblood Blood
13 chr6:71451800-71481000 Weak transcription Fetal Muscle Trunk muscle
14 chr6:71451800-71488200 Weak transcription Primary hematopoietic stem cells short term culture blood
15 chr6:71451800-71488400 Weak transcription Pancreas Pancrea
16 chr6:71453000-71489800 Weak transcription Psoas Muscle Psoas
17 chr6:71460200-71480200 Weak transcription Fetal Intestine Large intestine
18 chr6:71461400-71481000 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
19 chr6:71463200-71492600 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
20 chr6:71463400-71488200 Weak transcription Stomach Smooth Muscle stomach
21 chr6:71464800-71474600 Weak transcription Fetal Thymus thymus
22 chr6:71465800-71488200 Weak transcription Primary B cells from peripheral blood blood
23 chr6:71466200-71474400 Weak transcription Primary monocytes fromperipheralblood blood
24 chr6:71466200-71476400 Weak transcription Fetal Brain Female brain
25 chr6:71466200-71485800 Weak transcription Primary T helper 17 cells PMA-I stimulated --
26 chr6:71466200-71488400 Weak transcription Aorta Aorta
27 chr6:71466400-71476800 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
28 chr6:71466400-71480200 Weak transcription Cortex derived primary cultured neurospheres brain
29 chr6:71466400-71481600 Weak transcription Primary Natural Killer cells fromperipheralblood blood
30 chr6:71466400-71483400 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
31 chr6:71466400-71487600 Weak transcription Primary neutrophils fromperipheralblood blood
32 chr6:71466400-71493200 Weak transcription Dnd41 blood
33 chr6:71466400-71494800 Weak transcription Small Intestine intestine
34 chr6:71466400-71508800 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
35 chr6:71466600-71482600 Weak transcription Primary T helper cells PMA-I stimulated --
36 chr6:71466600-71488600 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
37 chr6:71467000-71486200 Weak transcription Brain Germinal Matrix brain
38 chr6:71468000-71474200 Weak transcription Brain Substantia Nigra brain
39 chr6:71468800-71532200 Weak transcription Primary T cells fromperipheralblood blood
40 chr6:71469200-71481200 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
41 chr6:71469800-71488400 Weak transcription Fetal Muscle Leg muscle
42 chr6:71470000-71475800 Weak transcription iPS-20b Cell Line embryonic stem cell
43 chr6:71470600-71474600 Weak transcription HUES6 Cell Line embryonic stem cell
44 chr6:71470800-71474800 Weak transcription HUES48 Cell Line embryonic stem cell
45 chr6:71471200-71481000 Weak transcription Fetal Adrenal Gland Adrenal Gland
46 chr6:71471200-71490600 Weak transcription Right Ventricle heart
47 chr6:71471800-71474200 Weak transcription Fetal Intestine Small intestine
48 chr6:71471800-71480800 Weak transcription Lung lung
49 chr6:71472000-71484800 Weak transcription Pancreatic Islets Pancreatic Islet
50 chr6:71472200-71488400 Weak transcription Gastric stomach

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Last update: Aug 31, 2015