Variant report

No.	Distal block	Cell Line	Cell type
1	chr8:106952181..106953106-chr8:107603771..107604489,3	MCF-7	breast:
2	chr8:106917865..106918639-chr8:106952052..106952798,2	MCF-7	breast:
3	chr8:106952193..106952705-chr8:107868814..107869363,2	MCF-7	breast:
4	chr8:106951964..106952911-chr8:107092917..107093874,3	MCF-7	breast:
5	chr8:106952270..106952820-chr8:107091540..107092239,2	MCF-7	breast:
6	chr8:106951745..106953008-chr8:107603708..107604641,6	MCF-7	breast:
7	chr8:106932622..106934542-chr8:106950174..106953659,3	K562	blood:

rSNPs within LD-proxies of this variant (count:20)

rs_ID	r²[population]
rs11988877	0.82[AMR][1000 genomes];0.99[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs12674526	0.86[ASN][1000 genomes]
rs12678627	0.86[ASN][1000 genomes]
rs12681930	0.86[ASN][1000 genomes]
rs12681941	0.86[ASN][1000 genomes]
rs1835265	0.86[ASN][1000 genomes]
rs57607757	0.81[AFR][1000 genomes]
rs59539534	0.86[ASN][1000 genomes]
rs59852201	0.84[EUR][1000 genomes]
rs60482457	0.82[AFR][1000 genomes]
rs60786650	0.86[ASN][1000 genomes]
rs6469039	0.86[ASN][1000 genomes]
rs6469040	0.86[ASN][1000 genomes]
rs7015979	0.90[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs73293463	0.94[ASN][1000 genomes]
rs73297483	0.86[ASN][1000 genomes]
rs73297486	0.86[ASN][1000 genomes]
rs7813365	0.86[ASN][1000 genomes]
rs7833854	0.84[EUR][1000 genomes]
rs7833862	0.80[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:4 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1021369	chr8:106493317-107243322	Enhancers Weak transcription Active TSS Strong transcription Flanking Active TSS ZNF genes & repeats Genic enhancers Transcr. at gene 5' and 3' Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	13 gene(s)	inside rSNPs	diseases
2	nsv611840	chr8:106913294-107265915	Enhancers Weak transcription Flanking Active TSS Active TSS ZNF genes & repeats Strong transcription Transcr. at gene 5' and 3' Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	6 gene(s)	inside rSNPs	diseases
3	nsv1019518	chr8:106923469-106959075	Enhancers Active TSS Weak transcription ZNF genes & repeats Flanking Active TSS	TF binding region Chromatin interactive region lncRNA	2 gene(s)	inside rSNPs	diseases
4	nsv515580	chr8:106925995-106956427	Weak transcription Enhancers Active TSS Flanking Active TSS ZNF genes & repeats	TF binding region Chromatin interactive region lncRNA	2 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:7 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr8:106952000-106952400	Active TSS	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
2	chr8:106952000-106952400	Active TSS	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
3	chr8:106952000-106952400	Active TSS	Brain Dorsolateral Prefrontal Cortex	brain
4	chr8:106952000-106952400	Flanking Active TSS	Osteobl	bone
5	chr8:106952200-106952400	Flanking Active TSS	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
6	chr8:106952200-106952400	Enhancers	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
7	chr8:106952200-106952600	Enhancers	Brain Angular Gyrus	brain

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