Variant report

rSNPs within LD-proxies of this variant (count:26)

rs_ID	r²[population]
rs11988877	0.84[ASN][1000 genomes]
rs12549543	0.87[AFR][1000 genomes]
rs12674526	1.00[ASN][1000 genomes]
rs12678627	1.00[ASN][1000 genomes]
rs12681930	1.00[ASN][1000 genomes]
rs12681941	1.00[ASN][1000 genomes]
rs13272380	0.86[JPT][hapmap]
rs1429672	0.87[AFR][1000 genomes]
rs1835265	1.00[AFR][1000 genomes];0.97[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2115701	0.83[AFR][1000 genomes]
rs4734132	0.85[AFR][1000 genomes]
rs4734904	0.87[AFR][1000 genomes]
rs57368724	0.87[AMR][1000 genomes];0.90[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs59539534	0.94[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs60786650	1.00[ASN][1000 genomes]
rs6469039	0.92[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7015979	0.86[ASN][1000 genomes]
rs73293463	0.86[ASN][1000 genomes]
rs73297483	1.00[ASN][1000 genomes]
rs73297486	1.00[ASN][1000 genomes]
rs7462272	0.83[AFR][1000 genomes]
rs7463781	0.87[AFR][1000 genomes]
rs7465106	0.87[AFR][1000 genomes]
rs7813365	1.00[ASN][1000 genomes]
rs7824634	0.86[ASN][1000 genomes]
rs7833862	0.86[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:5 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1021369	chr8:106493317-107243322	Enhancers Weak transcription Active TSS Strong transcription Flanking Active TSS ZNF genes & repeats Genic enhancers Transcr. at gene 5' and 3' Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	13 gene(s)	inside rSNPs	diseases
2	nsv611840	chr8:106913294-107265915	Enhancers Weak transcription Flanking Active TSS Active TSS ZNF genes & repeats Strong transcription Transcr. at gene 5' and 3' Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	6 gene(s)	inside rSNPs	diseases
3	nsv611842	chr8:107076421-107115482	Enhancers Weak transcription Flanking Active TSS ZNF genes & repeats Active TSS	TF binding region CpG island Chromatin interactive region	3 gene(s)	inside rSNPs	diseases
4	nsv891262	chr8:107076421-107209378	Enhancers Weak transcription Flanking Active TSS ZNF genes & repeats Active TSS	TF binding region CpG island Chromatin interactive region lncRNA	4 gene(s)	inside rSNPs	diseases
5	esv2830191	chr8:107088426-107115482	Weak transcription Enhancers Flanking Active TSS ZNF genes & repeats Active TSS	Chromatin interactive region	3 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:2 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr8:107108800-107115200	Weak transcription	iPS DF 6.9 Cell Line	embryonic stem cell
2	chr8:107109000-107116400	Weak transcription	Osteobl	bone

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