Variant report

rSNPs within LD-proxies of this variant (count:20)

rs_ID	r²[population]
rs11988877	0.84[ASN][1000 genomes]
rs12674526	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12678627	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12681930	0.97[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12681941	0.98[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs1429675	0.81[AFR][1000 genomes]
rs1835265	1.00[ASN][1000 genomes]
rs57368724	0.89[ASN][1000 genomes]
rs59539534	1.00[ASN][1000 genomes]
rs60786650	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs6469039	1.00[ASN][1000 genomes]
rs6469040	1.00[ASN][1000 genomes]
rs7015979	0.86[ASN][1000 genomes]
rs73293463	0.86[ASN][1000 genomes]
rs73297483	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs736627	0.81[AFR][1000 genomes]
rs7813365	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7824634	0.86[ASN][1000 genomes]
rs7833862	0.86[ASN][1000 genomes]
rs9642802	0.81[AFR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:3 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1021369	chr8:106493317-107243322	Enhancers Weak transcription Active TSS Strong transcription Flanking Active TSS ZNF genes & repeats Genic enhancers Transcr. at gene 5' and 3' Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	13 gene(s)	inside rSNPs	diseases
2	nsv611840	chr8:106913294-107265915	Enhancers Weak transcription Flanking Active TSS Active TSS ZNF genes & repeats Strong transcription Transcr. at gene 5' and 3' Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	6 gene(s)	inside rSNPs	diseases
3	nsv891262	chr8:107076421-107209378	Enhancers Weak transcription Flanking Active TSS ZNF genes & repeats Active TSS	TF binding region CpG island Chromatin interactive region lncRNA	4 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:12 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr8:107115000-107117600	Enhancers	IMR90 fetal lung fibroblasts Cell Line	lung
2	chr8:107115400-107117400	Enhancers	ES-I3 Cell Line	embryonic stem cell
3	chr8:107115600-107117400	Enhancers	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
4	chr8:107116400-107117200	Enhancers	NHLF	lung
5	chr8:107116400-107117400	Enhancers	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
6	chr8:107116400-107117400	Enhancers	A549	lung
7	chr8:107116400-107117400	Enhancers	Osteobl	bone
8	chr8:107116400-107118400	Enhancers	NHDF-Ad	bronchial
9	chr8:107116600-107117400	Enhancers	Muscle Satellite Cultured Cells	--
10	chr8:107116600-107117400	Enhancers	NH-A	brain
11	chr8:107116800-107117000	Flanking Active TSS	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
12	chr8:107116800-107117400	Enhancers	Stomach Mucosa	stomach

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