Variant report

Variant	rs7831551
Chromosome Location	chr8:125826058-125826059
allele	A/C
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

TF binding
region (count:0)
CpG islands
(count:0)
Chromatin interactive
region (count:14)
LncRNA
region (count:0)
Mature miRNA
region (count: 0)
miRNA target
sites (count:0)

No data

No data

(count:14 , 50 per page) page: 1

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr8:125710029..125712501-chr8:125825729..125827888,2	K562	blood:
2	chr8:125824069..125826348-chr8:125852488..125855335,2	K562	blood:
3	chr8:125825097..125827152-chr8:125954026..125955996,2	K562	blood:
4	chr8:125825562..125827857-chr8:125852824..125856863,3	MCF-7	breast:
5	chr8:125548570..125552806-chr8:125825742..125828762,4	K562	blood:
6	chr8:125549492..125551989-chr8:125824960..125829256,5	K562	blood:
7	chr8:125825851..125829198-chr8:125950064..125952936,3	K562	blood:
8	chr8:125824915..125827447-chr8:125870554..125873163,2	K562	blood:
9	chr8:125730674..125732693-chr8:125825139..125827888,2	K562	blood:
10	chr8:125822757..125824811-chr8:125825500..125827545,2	MCF-7	breast:
11	chr8:125825929..125828748-chr8:126103559..126105908,4	K562	blood:
12	chr8:125653582..125656116-chr8:125824961..125827801,3	K562	blood:
13	chr8:125825958..125827774-chr8:125846394..125847974,2	K562	blood:
14	chr8:125825718..125829730-chr8:126008807..126013107,8	K562	blood:

No data

No data

No data

Variant related genes	Relation type
ENSG00000147684	Chromatin interaction
ENSG00000147687	Chromatin interaction
ENSG00000104549	Chromatin interaction
ENSG00000164961	Chromatin interaction
ENSG00000156831	Chromatin interaction
ENSG00000253513	Chromatin interaction
ENSG00000249816	Chromatin interaction

Extended variants
information (count: 6 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:4)

rs_ID	r²[population]
rs17395092	1.00[ASN][1000 genomes]
rs62528792	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs62528825	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs7000095	1.00[AFR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv891434	chr8:125630655-126324432	Strong transcription Enhancers Weak transcription Active TSS Genic enhancers Flanking Active TSS Flanking Bivalent TSS/Enh ZNF genes & repeats Bivalent Enhancer Transcr. at gene 5' and 3' Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	80 gene(s)	inside rSNPs	diseases
2	nsv1016502	chr8:125657664-125845074	Weak transcription Strong transcription Flanking Bivalent TSS/Enh Flanking Active TSS Enhancers Active TSS Bivalent Enhancer Bivalent/Poised TSS Genic enhancers Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA	19 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:9 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr8:125821600-125827000	Weak transcription	Fetal Lung	lung
2	chr8:125821800-125827200	Weak transcription	Adipose Nuclei	Adipose
3	chr8:125821800-125827400	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
4	chr8:125822000-125826400	Weak transcription	HSMM	muscle
5	chr8:125822000-125826600	Weak transcription	HSMMtube	muscle
6	chr8:125822200-125826400	Weak transcription	Monocytes-CD14+_RO01746	blood
7	chr8:125822200-125827000	Weak transcription	Osteobl	bone
8	chr8:125823800-125827000	Weak transcription	Fetal Brain Male	brain
9	chr8:125825200-125827400	Weak transcription	IMR90 fetal lung fibroblasts Cell Line	lung

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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