Variant report

Variant	rs7834923
Chromosome Location	chr8:122398900-122398901
allele	C/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr8:122345625..122347398-chr8:122398466..122401930,3	K562	blood:

Extended variants
information (count: 34 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:30)

rs_ID	r²[population]
rs10956031	0.91[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs10956036	0.99[AFR][1000 genomes];1.00[AMR][1000 genomes];0.97[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs10956037	0.96[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs13258852	0.93[ASN][1000 genomes]
rs13273394	0.91[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs13275393	0.91[ASN][1000 genomes]
rs16892972	0.96[ASN][1000 genomes]
rs16895184	0.88[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs16895194	0.92[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs16895321	0.92[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs1906215	0.93[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs2891940	0.93[AFR][1000 genomes];0.98[AMR][1000 genomes];0.97[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs34247899	0.96[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs34352931	0.83[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs35089934	0.96[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs35131741	0.96[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs35426682	0.93[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs4363200	0.95[AMR][1000 genomes];0.93[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs55767339	0.96[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs66510431	0.93[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs67504931	0.89[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs6985507	0.96[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs7001692	0.96[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs7007512	0.91[ASN][1000 genomes]
rs7013228	1.00[CEU][hapmap];1.00[CHB][hapmap];0.95[JPT][hapmap];0.95[AMR][1000 genomes];0.97[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7813908	0.93[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs7831540	0.99[AFR][1000 genomes];1.00[AMR][1000 genomes];0.95[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7833556	0.93[AFR][1000 genomes];0.98[AMR][1000 genomes];0.97[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs7833779	1.00[CEU][hapmap];1.00[CHB][hapmap];0.95[JPT][hapmap];0.94[AFR][1000 genomes];0.97[AMR][1000 genomes];0.97[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs9792293	1.00[CEU][hapmap];1.00[CHB][hapmap];0.95[JPT][hapmap];0.93[YRI][hapmap];0.94[AFR][1000 genomes];1.00[AMR][1000 genomes];0.97[EUR][1000 genomes];0.99[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:4 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv831445	chr8:122336877-122509300	Weak transcription Enhancers Flanking Active TSS Active TSS ZNF genes & repeats Strong transcription	TF binding region CpG island Chromatin interactive region lncRNA	2 gene(s)	inside rSNPs	diseases
2	esv1808330	chr8:122385614-122415509	Enhancers Flanking Active TSS Weak transcription ZNF genes & repeats Active TSS	TF binding region Chromatin interactive region lncRNA	1 gene(s)	inside rSNPs	diseases
3	esv2755780	chr8:122393819-122426819	Active TSS Weak transcription Enhancers Flanking Active TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region	1 gene(s)	inside rSNPs	diseases
4	nsv1027842	chr8:122394235-122427343	Enhancers Weak transcription Flanking Active TSS Active TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region	1 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:12 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr8:122394200-122405200	Weak transcription	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
2	chr8:122395400-122400400	Weak transcription	Primary neutrophils fromperipheralblood	blood
3	chr8:122397200-122400400	Weak transcription	Osteobl	bone
4	chr8:122397200-122400600	Weak transcription	Adipose Nuclei	Adipose
5	chr8:122397600-122400200	Weak transcription	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
6	chr8:122397600-122400600	Weak transcription	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
7	chr8:122397800-122399800	Weak transcription	Primary monocytes fromperipheralblood	blood
8	chr8:122397800-122400200	Weak transcription	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
9	chr8:122397800-122400200	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Male	--
10	chr8:122397800-122400200	Weak transcription	Monocytes-CD14+_RO01746	blood
11	chr8:122397800-122410000	Weak transcription	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
12	chr8:122398800-122399000	Enhancers	HUES64 Cell Line	embryonic stem cell

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