Variant report

Variant	rs7836429
Chromosome Location	chr8:130014200-130014201
allele	A/C
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr8:130006740..130008794-chr8:130012462..130015345,2	K562	blood:

Extended variants
information (count: 61 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:60)

rs_ID	r²[population]
rs10105449	0.90[AMR][1000 genomes];0.91[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs10435553	0.85[EUR][1000 genomes]
rs10435555	0.85[EUR][1000 genomes]
rs10448000	0.85[EUR][1000 genomes]
rs10505531	0.99[AFR][1000 genomes];0.92[AMR][1000 genomes];0.81[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs1157275	0.91[AFR][1000 genomes];0.96[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12541935	0.85[EUR][1000 genomes]
rs13248403	0.86[AFR][1000 genomes];0.85[AMR][1000 genomes];0.92[ASN][1000 genomes]
rs13279328	0.85[EUR][1000 genomes]
rs1372442	0.91[AFR][1000 genomes];0.96[AMR][1000 genomes];0.99[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs1372443	0.91[AFR][1000 genomes];0.96[AMR][1000 genomes];0.99[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs1372453	0.81[AFR][1000 genomes];0.92[AMR][1000 genomes];0.91[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs16903947	0.99[AFR][1000 genomes];0.92[AMR][1000 genomes];0.81[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs2395867	0.86[AFR][1000 genomes];0.84[AMR][1000 genomes];0.95[ASN][1000 genomes]
rs34294444	0.85[EUR][1000 genomes]
rs34294531	0.85[EUR][1000 genomes]
rs34495693	0.85[EUR][1000 genomes]
rs34892339	0.80[AFR][1000 genomes];0.85[EUR][1000 genomes]
rs35658327	0.85[EUR][1000 genomes]
rs35721910	0.84[EUR][1000 genomes]
rs4236737	0.91[AFR][1000 genomes];0.96[AMR][1000 genomes];0.99[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs4302810	0.91[AFR][1000 genomes];0.94[AMR][1000 genomes];0.99[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs4333552	0.81[AFR][1000 genomes]
rs4371972	0.91[AFR][1000 genomes];0.96[AMR][1000 genomes];0.99[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs4385435	0.84[AFR][1000 genomes];0.85[AMR][1000 genomes];0.88[ASN][1000 genomes]
rs4493878	0.85[EUR][1000 genomes]
rs4526322	0.89[AFR][1000 genomes];0.90[AMR][1000 genomes];0.97[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs4551306	0.86[AFR][1000 genomes];0.85[AMR][1000 genomes];0.90[ASN][1000 genomes]
rs4566994	0.85[EUR][1000 genomes]
rs4613963	0.90[AMR][1000 genomes];0.89[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs4636163	0.91[EUR][1000 genomes]
rs4644199	0.86[AFR][1000 genomes];0.96[AMR][1000 genomes];0.98[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs4733672	0.90[AFR][1000 genomes];0.88[AMR][1000 genomes];0.81[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs57797099	0.85[EUR][1000 genomes]
rs6470676	0.91[AFR][1000 genomes];0.96[AMR][1000 genomes];0.99[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs6470677	0.91[AFR][1000 genomes];0.96[AMR][1000 genomes];0.99[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs6470692	0.83[AFR][1000 genomes];0.81[AMR][1000 genomes];0.91[EUR][1000 genomes]
rs66879839	0.83[EUR][1000 genomes]
rs67401439	0.85[EUR][1000 genomes]
rs67459926	0.81[EUR][1000 genomes]
rs6994850	0.89[AFR][1000 genomes];0.86[AMR][1000 genomes];0.87[ASN][1000 genomes]
rs6998898	0.81[AFR][1000 genomes]
rs7006185	0.89[AFR][1000 genomes];0.92[AMR][1000 genomes];0.95[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs7013044	0.82[AMR][1000 genomes];0.87[ASN][1000 genomes]
rs73382040	0.85[EUR][1000 genomes]
rs73382043	0.85[EUR][1000 genomes]
rs7815639	0.85[EUR][1000 genomes]
rs7816364	0.84[EUR][1000 genomes]
rs7820114	0.92[AFR][1000 genomes];0.96[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7832166	0.84[EUR][1000 genomes]
rs7832400	0.84[EUR][1000 genomes]
rs7832834	0.84[EUR][1000 genomes]
rs7833157	0.85[EUR][1000 genomes]
rs7834731	0.89[AFR][1000 genomes];0.93[AMR][1000 genomes];0.94[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs7836336	0.88[AFR][1000 genomes];0.85[AMR][1000 genomes];0.92[ASN][1000 genomes]
rs7840107	0.85[EUR][1000 genomes]
rs7843664	0.89[AFR][1000 genomes];0.93[AMR][1000 genomes];0.95[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs9643242	0.89[AMR][1000 genomes];0.84[EUR][1000 genomes]
rs9650100	0.84[EUR][1000 genomes]
rs9650101	0.85[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv437633	chr8:130014200-130022257	Enhancers Weak transcription Strong transcription Genic enhancers	Chromatin interactive region	n/a	inside rSNPs	n/a

No data

Chromatin state (count:14 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr8:130002200-130015600	Weak transcription	Fetal Thymus	thymus
2	chr8:130011400-130016000	Enhancers	Foreskin Melanocyte Primary Cells skin03	Skin
3	chr8:130011800-130017200	Weak transcription	Osteobl	bone
4	chr8:130012000-130017000	Weak transcription	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
5	chr8:130012000-130017200	Weak transcription	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
6	chr8:130012200-130017200	Weak transcription	Foreskin Fibroblast Primary Cells skin01	Skin
7	chr8:130013200-130015400	Strong transcription	Dnd41	blood
8	chr8:130013400-130016400	Enhancers	Fetal Muscle Leg	muscle
9	chr8:130013600-130014600	Enhancers	Fetal Lung	lung
10	chr8:130013600-130014600	Enhancers	Fetal Stomach	stomach
11	chr8:130013600-130015000	Enhancers	HSMMtube	muscle
12	chr8:130013600-130015400	Enhancers	HSMM	muscle
13	chr8:130013800-130014600	Weak transcription	Foreskin Melanocyte Primary Cells skin01	Skin
14	chr8:130014000-130014600	Enhancers	Muscle Satellite Cultured Cells	--

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