Variant report

Variant	rs7837802
Chromosome Location	chr8:34683207-34683208
allele	A/C
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 38 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:29)

rs_ID	r²[population]
rs10093005	0.85[EUR][1000 genomes];0.80[ASN][1000 genomes]
rs10283194	0.82[EUR][1000 genomes];0.80[ASN][1000 genomes]
rs1317084	0.82[EUR][1000 genomes];0.80[ASN][1000 genomes]
rs1403375	0.82[EUR][1000 genomes];0.80[ASN][1000 genomes]
rs16915	0.82[EUR][1000 genomes];0.80[ASN][1000 genomes]
rs1807927	0.82[EUR][1000 genomes];0.80[ASN][1000 genomes]
rs1916170	0.80[ASN][1000 genomes]
rs2254811	0.82[EUR][1000 genomes];0.80[ASN][1000 genomes]
rs2254888	0.82[EUR][1000 genomes];0.80[ASN][1000 genomes]
rs2256710	0.82[EUR][1000 genomes];0.80[ASN][1000 genomes]
rs2257117	0.82[EUR][1000 genomes];0.80[ASN][1000 genomes]
rs2257183	0.82[EUR][1000 genomes];0.80[ASN][1000 genomes]
rs2685593	0.82[EUR][1000 genomes];0.80[ASN][1000 genomes]
rs2685594	0.80[ASN][1000 genomes]
rs2685595	0.82[EUR][1000 genomes];0.80[ASN][1000 genomes]
rs2685596	0.82[EUR][1000 genomes];0.80[ASN][1000 genomes]
rs2685602	0.82[EUR][1000 genomes];0.80[ASN][1000 genomes]
rs2685603	0.82[EUR][1000 genomes];0.80[ASN][1000 genomes]
rs2685604	0.82[EUR][1000 genomes];0.80[ASN][1000 genomes]
rs2685605	0.82[EUR][1000 genomes];0.80[ASN][1000 genomes]
rs2685609	0.82[EUR][1000 genomes];0.80[ASN][1000 genomes]
rs2685610	0.82[EUR][1000 genomes];0.80[ASN][1000 genomes]
rs2687543	0.82[EUR][1000 genomes];0.80[ASN][1000 genomes]
rs2687544	0.82[EUR][1000 genomes];0.80[ASN][1000 genomes]
rs2687545	0.82[EUR][1000 genomes];0.80[ASN][1000 genomes]
rs2687546	0.82[EUR][1000 genomes];0.80[ASN][1000 genomes]
rs2687548	0.82[EUR][1000 genomes];0.80[ASN][1000 genomes]
rs2687549	0.82[EUR][1000 genomes];0.80[ASN][1000 genomes]
rs28538456	0.82[EUR][1000 genomes];0.84[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:9 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv890715	chr8:34568015-34700530	Enhancers Weak transcription Flanking Active TSS Strong transcription Active TSS ZNF genes & repeats	TF binding region Chromatin interactive region lncRNA	1 gene(s)	inside rSNPs	diseases
2	nsv465635	chr8:34631970-34710118	Flanking Active TSS Weak transcription Enhancers Strong transcription ZNF genes & repeats Active TSS	TF binding region Chromatin interactive region lncRNA	1 gene(s)	inside rSNPs	diseases
3	nsv610932	chr8:34631970-34710118	Weak transcription Active TSS Enhancers Flanking Active TSS ZNF genes & repeats Strong transcription	TF binding region Chromatin interactive region lncRNA	1 gene(s)	inside rSNPs	diseases
4	esv3693375	chr8:34631970-34780509	Weak transcription ZNF genes & repeats Enhancers Active TSS Flanking Active TSS Strong transcription	TF binding region CpG island Chromatin interactive region lncRNA	2 gene(s)	inside rSNPs	diseases
5	nsv972208	chr8:34644254-34790092	Enhancers Weak transcription ZNF genes & repeats Flanking Active TSS Active TSS Strong transcription	TF binding region CpG island Chromatin interactive region lncRNA	1 gene(s)	inside rSNPs	diseases
6	nsv465636	chr8:34649550-34710118	Weak transcription Enhancers Active TSS Flanking Active TSS ZNF genes & repeats Strong transcription	Chromatin interactive region lncRNA	n/a	inside rSNPs	diseases
7	nsv610933	chr8:34649550-34710118	Enhancers Weak transcription ZNF genes & repeats Active TSS Flanking Active TSS Strong transcription	Chromatin interactive region lncRNA	n/a	inside rSNPs	diseases
8	nsv6148	chr8:34669644-34714096	Weak transcription Enhancers Flanking Active TSS Active TSS ZNF genes & repeats Strong transcription	Chromatin interactive region	n/a	inside rSNPs	diseases
9	esv3347112	chr8:34683013-34683324	Weak transcription	n/a	n/a	inside rSNPs	diseases

No data

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr8:34673400-34701600	Weak transcription	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived

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