Variant report

Variant	rs7840485
Chromosome Location	chr8:107585632-107585633
allele	A/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 17 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:15)

rs_ID	r²[population]
rs60293753	1.00[AMR][1000 genomes]
rs60554121	1.00[AMR][1000 genomes]
rs6985468	1.00[AMR][1000 genomes]
rs73305148	1.00[AMR][1000 genomes]
rs73305163	1.00[AMR][1000 genomes]
rs73305167	1.00[AMR][1000 genomes]
rs73305173	1.00[AMR][1000 genomes]
rs73305176	1.00[AMR][1000 genomes]
rs73305190	1.00[AMR][1000 genomes]
rs73307197	1.00[AMR][1000 genomes]
rs73309233	1.00[AMR][1000 genomes]
rs73309246	1.00[AMR][1000 genomes]
rs73309280	1.00[AMR][1000 genomes]
rs73309281	1.00[AMR][1000 genomes]
rs7828777	1.00[AMR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv533134	chr8:107307812-107670002	Weak transcription Enhancers Strong transcription Bivalent Enhancer Flanking Active TSS Active TSS Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Genic enhancers ZNF genes & repeats Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	5 gene(s)	inside rSNPs	diseases
2	esv3417427	chr8:107572825-107590283	Weak transcription Genic enhancers Enhancers Active TSS Bivalent Enhancer Strong transcription	TF binding region Chromatin interactive region	1 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:2 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr8:107512400-107620200	Weak transcription	Aorta	Aorta
2	chr8:107573800-107589800	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived

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dbSNP/dbVar ID: rs12345 /nsv7879
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chromosomal regions: chr1:12345-34567

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