Variant report

Variant	rs7841194
Chromosome Location	chr8:49176272-49176273
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type
1	chr8:49175832..49177590-chr8:49186476..49188807,2	K562	blood:
2	chr8:49175604..49178104-chr8:49181839..49183388,2	K562	blood:
3	chr8:49170099..49172520-chr8:49175155..49176676,2	MCF-7	breast:

Extended variants
information (count: 17 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:14)

rs_ID	r²[population]
rs10099462	0.90[EUR][1000 genomes]
rs10429272	0.89[EUR][1000 genomes]
rs10808911	0.98[EUR][1000 genomes]
rs11778279	0.98[EUR][1000 genomes]
rs11783647	0.90[EUR][1000 genomes]
rs11783734	0.81[EUR][1000 genomes]
rs12675189	0.89[EUR][1000 genomes]
rs4455863	0.96[EUR][1000 genomes]
rs4455864	0.99[EUR][1000 genomes]
rs4489344	0.97[EUR][1000 genomes]
rs4531079	0.95[EUR][1000 genomes]
rs4537328	0.99[EUR][1000 genomes]
rs4639551	0.98[EUR][1000 genomes]
rs4873271	0.99[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:3 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv831310	chr8:49080177-49256440	Enhancers Active TSS Weak transcription Flanking Bivalent TSS/Enh Flanking Active TSS ZNF genes & repeats Bivalent Enhancer Bivalent/Poised TSS Genic enhancers Strong transcription	TF binding region CpG island Chromatin interactive region lncRNA	5 gene(s)	inside rSNPs	diseases
2	nsv831311	chr8:49106160-49290209	Enhancers Weak transcription Bivalent Enhancer Flanking Active TSS Bivalent/Poised TSS Active TSS ZNF genes & repeats Strong transcription Flanking Bivalent TSS/Enh Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA	5 gene(s)	inside rSNPs	diseases
3	esv1808901	chr8:49173411-49201882	Weak transcription Enhancers Flanking Active TSS Strong transcription ZNF genes & repeats Bivalent Enhancer Genic enhancers Active TSS	Chromatin interactive region	n/a	inside rSNPs	n/a

No data

Chromatin state (count:21 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr8:49173200-49178800	Weak transcription	Spleen	Spleen
2	chr8:49173200-49182000	Weak transcription	Esophagus	oesophagus
3	chr8:49173400-49186400	Weak transcription	iPS DF 6.9 Cell Line	embryonic stem cell
4	chr8:49173800-49176600	Enhancers	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
5	chr8:49174200-49177200	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
6	chr8:49174200-49181600	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
7	chr8:49174200-49186400	Weak transcription	Right Atrium	heart
8	chr8:49174800-49179000	Weak transcription	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
9	chr8:49175000-49177200	Weak transcription	Fetal Stomach	stomach
10	chr8:49175000-49178000	Weak transcription	Adipose Nuclei	Adipose
11	chr8:49175000-49186600	Weak transcription	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
12	chr8:49175200-49176400	Weak transcription	HUES6 Cell Line	embryonic stem cell
13	chr8:49175200-49177400	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
14	chr8:49175200-49178800	Weak transcription	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
15	chr8:49175200-49179000	Weak transcription	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
16	chr8:49175200-49179200	Weak transcription	H9 Cell Line	embryonic stem cell
17	chr8:49175400-49176600	Weak transcription	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
18	chr8:49175400-49178600	Weak transcription	H9 Derived Neuron Cultured Cells	ES cell derived
19	chr8:49175800-49178200	Enhancers	IMR90 fetal lung fibroblasts Cell Line	lung
20	chr8:49176200-49176400	Weak transcription	iPS-18 Cell Line	embryonic stem cell
21	chr8:49176200-49176400	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast

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