Variant report

Variant	rs7847481
Chromosome Location	chr9:101791710-101791711
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type
1	chr9:101786238..101788647-chr9:101789289..101792240,2	K562	blood:
2	chr9:101789435..101791807-chr9:101823952..101826363,2	K562	blood:
3	chr9:101781442..101783754-chr9:101790736..101792592,2	MCF-7	breast:

Extended variants
information (count: 5 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:3)

rs_ID	r²[population]
rs16918238	1.00[AMR][1000 genomes]
rs7030965	1.00[AMR][1000 genomes]
rs7034533	1.00[AMR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv466442	chr9:101788522-101816399	ZNF genes & repeats Enhancers Weak transcription Genic enhancers Strong transcription Transcr. at gene 5' and 3' Bivalent Enhancer Flanking Active TSS Active TSS	TF binding region CpG island Chromatin interactive region	4 gene(s)	inside rSNPs	diseases
2	nsv614954	chr9:101788522-101816399	Strong transcription Genic enhancers Enhancers Weak transcription ZNF genes & repeats Flanking Active TSS Active TSS Bivalent Enhancer Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region	4 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:51 , 50 per page) page: 1 2

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr9:101761600-101814400	Weak transcription	Gastric	stomach
2	chr9:101773000-101793600	Weak transcription	Aorta	Aorta
3	chr9:101781200-101791800	Genic enhancers	IMR90 fetal lung fibroblasts Cell Line	lung
4	chr9:101782000-101819800	Weak transcription	Colonic Mucosa	Colon
5	chr9:101786400-101794200	Strong transcription	Fetal Adrenal Gland	Adrenal Gland
6	chr9:101786600-101794000	Strong transcription	Fetal Muscle Trunk	muscle
7	chr9:101786600-101794000	Strong transcription	Fetal Muscle Leg	muscle
8	chr9:101787200-101806400	Weak transcription	Ovary	ovary
9	chr9:101787800-101792200	Weak transcription	Hela-S3	cervix
10	chr9:101788200-101803200	Weak transcription	Spleen	Spleen
11	chr9:101788800-101792600	Weak transcription	Primary Natural Killer cells fromperipheralblood	blood
12	chr9:101788800-101798400	Weak transcription	Pancreas	Pancrea
13	chr9:101789000-101793200	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
14	chr9:101789000-101796600	Weak transcription	Rectal Smooth Muscle	rectum
15	chr9:101789000-101812000	Weak transcription	Esophagus	oesophagus
16	chr9:101789200-101793000	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
17	chr9:101789200-101796600	Weak transcription	Colon Smooth Muscle	Colon
18	chr9:101789200-101805400	Weak transcription	Right Ventricle	heart
19	chr9:101789400-101797400	Weak transcription	Skeletal Muscle Male	skeletal muscle
20	chr9:101790000-101797200	Weak transcription	Left Ventricle	heart
21	chr9:101790400-101792400	Weak transcription	K562	blood
22	chr9:101790400-101794000	Enhancers	Placenta	Placenta
23	chr9:101790400-101795600	Weak transcription	Fetal Thymus	thymus
24	chr9:101790400-101795800	Weak transcription	Primary T helper cells fromperipheralblood	blood
25	chr9:101790400-101796400	Weak transcription	Primary T killer memory cells from peripheral blood	blood
26	chr9:101790400-101797400	Weak transcription	Primary T helper naive cells from peripheral blood	blood
27	chr9:101790400-101797800	Weak transcription	Primary T helper memory cells from peripheral blood 2	blood
28	chr9:101790600-101792400	Weak transcription	Stomach Smooth Muscle	stomach
29	chr9:101790600-101797600	Weak transcription	Duodenum Smooth Muscle	Duodenum
30	chr9:101790800-101796000	Weak transcription	Fetal Stomach	stomach
31	chr9:101790800-101796400	Weak transcription	Primary T cells fromperipheralblood	blood
32	chr9:101791000-101793400	Enhancers	Primary monocytes fromperipheralblood	blood
33	chr9:101791000-101797200	Weak transcription	Primary T helper naive cells fromperipheralblood	blood
34	chr9:101791200-101792800	Enhancers	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
35	chr9:101791200-101792800	Enhancers	Osteobl	bone
36	chr9:101791200-101793000	Enhancers	Monocytes-CD14+_RO01746	blood
37	chr9:101791200-101793600	Enhancers	Placenta Amnion	Placenta Amnion
38	chr9:101791200-101793800	Enhancers	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
39	chr9:101791200-101793800	Enhancers	NHDF-Ad	bronchial
40	chr9:101791200-101794000	Enhancers	NHLF	lung
41	chr9:101791200-101800600	Weak transcription	Brain Germinal Matrix	brain
42	chr9:101791400-101792200	Enhancers	HSMM	muscle
43	chr9:101791400-101792400	Bivalent Enhancer	Primary neutrophils fromperipheralblood	blood
44	chr9:101791400-101793600	Enhancers	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
45	chr9:101791400-101793600	Enhancers	Muscle Satellite Cultured Cells	--
46	chr9:101791400-101793600	Enhancers	NH-A	brain
47	chr9:101791600-101791800	Enhancers	Foreskin Fibroblast Primary Cells skin01	Skin
48	chr9:101791600-101793400	Enhancers	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
49	chr9:101791600-101793400	Genic enhancers	Adipose Nuclei	Adipose
50	chr9:101791600-101793800	Enhancers	HSMMtube	muscle

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