Variant report

Variant	rs7855208
Chromosome Location	chr9:85799310-85799311
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 6 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:4)

rs_ID	r²[population]
rs17086111	1.00[AMR][1000 genomes]
rs7038456	1.00[AMR][1000 genomes]
rs7043945	1.00[AMR][1000 genomes]
rs73481829	1.00[AMR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv893511	chr9:85495968-85833127	Weak transcription Enhancers ZNF genes & repeats Bivalent/Poised TSS Genic enhancers Flanking Bivalent TSS/Enh Flanking Active TSS Active TSS Bivalent Enhancer Strong transcription Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	9 gene(s)	inside rSNPs	diseases
2	nsv831642	chr9:85679425-85817338	Enhancers Weak transcription Flanking Active TSS Genic enhancers Active TSS Strong transcription Bivalent Enhancer ZNF genes & repeats Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	4 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:7 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr9:85798200-85800400	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
2	chr9:85798600-85801200	Enhancers	Fetal Heart	heart
3	chr9:85798800-85803600	Weak transcription	Psoas Muscle	Psoas
4	chr9:85799200-85799400	Enhancers	Right Atrium	heart
5	chr9:85799200-85799400	Enhancers	Stomach Smooth Muscle	stomach
6	chr9:85799200-85800400	Weak transcription	H9 Cell Line	embryonic stem cell
7	chr9:85799200-85800400	Weak transcription	iPS-18 Cell Line	embryonic stem cell

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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