Variant report

Variant	rs7863755
Chromosome Location	chr9:95395545-95395546
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

TF binding
region (count:0)
CpG islands
(count:0)
Chromatin interactive
region (count:8)
LncRNA
region (count:1)
Mature miRNA
region (count: 0)
miRNA target
sites (count:0)

No data

(count:8 , 50 per page) page: 1

No.	Distal block	Cell Line	Cell type
1	chr9:95391876..95393379-chr9:95395361..95397052,2	K562	blood:
2	chr7:27239923..27240575-chr9:95395146..95395698,2	NB4	blood:
3	chr9:95387784..95389622-chr9:95394276..95396366,2	K562	blood:
4	chr9:95387244..95389622-chr9:95392368..95395776,3	K562	blood:
5	chr9:95380381..95382817-chr9:95393296..95395754,2	MCF-7	breast:
6	chr9:95262992..95264581-chr9:95394509..95397028,2	MCF-7	breast:
7	chr9:95390729..95392335-chr9:95393254..95396164,2	MCF-7	breast:
8	chr9:95087499..95089368-chr9:95394343..95396442,2	K562	blood:

(count:1 , 50 per page) page: 1

No.	lncRNA name	Chromosome Location	lncRNA alias
1	lnc-CENPP-5	chr9:95393149-95395650	NONHSAT133198

No data

Variant related genes	Relation type
ENSG00000188312	Chromatin interaction
ENSG00000243766	Chromatin interaction
ENSG00000198000	Chromatin interaction
ENSG00000127080	Chromatin interaction

rs_ID	r²[population]
rs1111047	0.82[AMR][1000 genomes];0.82[EUR][1000 genomes]
rs4744142	0.80[AMR][1000 genomes]
rs6479427	0.82[AMR][1000 genomes]
rs7043114	0.80[AMR][1000 genomes]
rs7864757	0.83[AMR][1000 genomes];0.83[EUR][1000 genomes]
rs9886781	0.81[AMR][1000 genomes]
rs9969804	0.82[AMR][1000 genomes]

Chromatin state (count:125 , 50 per page) page: 1 2 3

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr9:95363400-95396000	Weak transcription	ES-I3 Cell Line	embryonic stem cell
2	chr9:95371400-95398200	Weak transcription	ES-WA7 Cell Line	embryonic stem cell
3	chr9:95371800-95399000	Weak transcription	Aorta	Aorta
4	chr9:95371800-95407400	Weak transcription	Pancreatic Islets	Pancreatic Islet
5	chr9:95373000-95421200	Strong transcription	Monocytes-CD14+_RO01746	blood
6	chr9:95373200-95399200	Weak transcription	Small Intestine	intestine
7	chr9:95375200-95405000	Weak transcription	Primary T helper memory cells from peripheral blood 1	blood
8	chr9:95375400-95403000	Strong transcription	Foreskin Keratinocyte Primary Cells skin03	Skin
9	chr9:95378200-95403600	Weak transcription	Fetal Brain Male	brain
10	chr9:95380000-95397200	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
11	chr9:95380800-95400600	Weak transcription	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
12	chr9:95380800-95429000	Weak transcription	Stomach Mucosa	stomach
13	chr9:95381400-95402800	Weak transcription	Primary T killer memory cells from peripheral blood	blood
14	chr9:95381600-95396000	Weak transcription	Primary T cells effector/memory enriched fromperipheralblood	blood
15	chr9:95382800-95397000	Weak transcription	Fetal Heart	heart
16	chr9:95383000-95395600	Weak transcription	Foreskin Melanocyte Primary Cells skin01	Skin
17	chr9:95384600-95396200	Weak transcription	Fetal Lung	lung
18	chr9:95384800-95421600	Strong transcription	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
19	chr9:95385000-95396800	Strong transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
20	chr9:95385800-95401800	Strong transcription	Osteobl	bone
21	chr9:95387400-95396200	Weak transcription	Colon Smooth Muscle	Colon
22	chr9:95389000-95398600	Strong transcription	A549	lung
23	chr9:95390000-95397400	Strong transcription	NH-A	brain
24	chr9:95390200-95411200	Strong transcription	Foreskin Melanocyte Primary Cells skin03	Skin
25	chr9:95390800-95396600	Strong transcription	Fetal Adrenal Gland	Adrenal Gland
26	chr9:95391200-95396800	Strong transcription	IMR90 fetal lung fibroblasts Cell Line	lung
27	chr9:95391800-95410600	Strong transcription	Left Ventricle	heart
28	chr9:95391800-95421000	Strong transcription	Primary hematopoietic stem cells short term culture	blood
29	chr9:95392000-95396200	Strong transcription	Fetal Muscle Leg	muscle
30	chr9:95392000-95407200	Strong transcription	NHLF	lung
31	chr9:95392000-95414600	Strong transcription	Duodenum Mucosa	Duodenum
32	chr9:95392000-95419600	Strong transcription	Primary T cells from cord blood	blood
33	chr9:95392200-95397800	Strong transcription	HSMMtube	muscle
34	chr9:95392200-95407600	Strong transcription	Primary B cells from peripheral blood	blood
35	chr9:95392200-95410800	Strong transcription	Brain Anterior Caudate	brain
36	chr9:95392400-95396800	Strong transcription	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
37	chr9:95392400-95396800	Strong transcription	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
38	chr9:95392400-95396800	Strong transcription	Liver	Liver
39	chr9:95392400-95420800	Strong transcription	Primary neutrophils fromperipheralblood	blood
40	chr9:95392600-95396800	Strong transcription	Brain Hippocampus Middle	brain
41	chr9:95392600-95403200	Strong transcription	Foreskin Keratinocyte Primary Cells skin02	Skin
42	chr9:95392600-95407800	Strong transcription	Brain Germinal Matrix	brain
43	chr9:95392800-95397200	Strong transcription	Breast Myoepithelial Primary Cells	Breast
44	chr9:95393200-95396000	Strong transcription	Fetal Stomach	stomach
45	chr9:95393200-95397000	Strong transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
46	chr9:95393200-95403400	Strong transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
47	chr9:95393200-95405600	Strong transcription	Fetal Intestine Small	intestine
48	chr9:95393200-95407600	Strong transcription	Lung	lung
49	chr9:95393200-95408400	Strong transcription	Fetal Intestine Large	intestine
50	chr9:95393200-95412000	Strong transcription	Right Ventricle	heart

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