Variant report

Variant	rs7869527
Chromosome Location	chr9:22092097-22092098
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 22 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:19)

rs_ID	r²[population]
rs10217720	1.00[EUR][1000 genomes]
rs10965234	0.96[ASN][1000 genomes]
rs10965235	0.96[ASN][1000 genomes]
rs16905644	1.00[EUR][1000 genomes]
rs17761319	0.92[ASN][1000 genomes]
rs17761446	0.94[ASN][1000 genomes]
rs17834367	0.95[ASN][1000 genomes]
rs17834457	0.94[ASN][1000 genomes]
rs57076710	0.81[AMR][1000 genomes]
rs59995170	0.96[ASN][1000 genomes]
rs6475605	0.86[AMR][1000 genomes]
rs66735603	1.00[EUR][1000 genomes]
rs72654222	1.00[EUR][1000 genomes]
rs72654246	1.00[EUR][1000 genomes]
rs72654298	1.00[EUR][1000 genomes]
rs73448354	0.90[AMR][1000 genomes]
rs73448363	0.90[AMR][1000 genomes]
rs7855190	1.00[EUR][1000 genomes]
rs944796	0.96[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:3 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv529609	chr9:21708371-22537069	Flanking Active TSS Enhancers Weak transcription Flanking Bivalent TSS/Enh Bivalent Enhancer Strong transcription Bivalent/Poised TSS Active TSS ZNF genes & repeats Transcr. at gene 5' and 3' Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	35 gene(s)	inside rSNPs	diseases
2	nsv8426	chr9:21763810-22176200	Weak transcription Strong transcription Active TSS Enhancers ZNF genes & repeats Bivalent Enhancer Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Flanking Active TSS Bivalent/Poised TSS Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	32 gene(s)	inside rSNPs	diseases
3	nsv531617	chr9:21985057-22809676	Genic enhancers Enhancers Flanking Active TSS Weak transcription Flanking Bivalent TSS/Enh Bivalent/Poised TSS Active TSS Bivalent Enhancer Transcr. at gene 5' and 3' Strong transcription ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	21 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:5 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr9:22080600-22098600	Weak transcription	Foreskin Fibroblast Primary Cells skin02	Skin
2	chr9:22086000-22097200	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
3	chr9:22089200-22096000	Weak transcription	Hela-S3	cervix
4	chr9:22089600-22096800	Weak transcription	Duodenum Mucosa	Duodenum
5	chr9:22089800-22096200	Weak transcription	Dnd41	blood

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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