Variant report
| Variant | rs7889721 |
|---|---|
| Chromosome Location | chrX:104068646-104068647 |
| allele | A/G |
| Outlinks | Ensembl UCSC |
- TF binding region (count:0)
- CpG islands (count:0)
- Chromatin interactive region (count:0)
- LncRNA region (count:0)
- Mature miRNA region (count: 0)
- miRNA target sites (count:0)
| No data |
| No data |
| No data |
| No data |
| No data |
| No data |
| No data |
rSNPs within LD-proxies of this variant (count:15)
| rs_ID | r2[population] |
|---|---|
| rs1343413 | 1.00[YRI][hapmap] |
| rs1419135 | 1.00[YRI][hapmap] |
| rs1419137 | 1.00[YRI][hapmap] |
| rs1578841 | 1.00[YRI][hapmap] |
| rs16985115 | 1.00[YRI][hapmap] |
| rs17003888 | 1.00[YRI][hapmap] |
| rs2051097 | 1.00[YRI][hapmap] |
| rs2145183 | 0.94[YRI][hapmap] |
| rs2145184 | 1.00[YRI][hapmap] |
| rs41529555 | 1.00[YRI][hapmap] |
| rs4354446 | 1.00[YRI][hapmap] |
| rs4826909 | 1.00[YRI][hapmap] |
| rs5917175 | 1.00[YRI][hapmap] |
| rs5917179 | 1.00[YRI][hapmap] |
| rs6621876 | 1.00[YRI][hapmap] |
Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page:
1
| No. | Variant name | Chromosome position | Chromatin state | Related regulatory elements | Target genes | Extended variants | Associated traits |
|---|---|---|---|---|---|---|---|
| 1 | nsv916408 | chrX:103552340-104347979 | Bivalent/Poised TSS Enhancers Weak transcription Flanking Bivalent TSS/Enh Active TSS Bivalent Enhancer Flanking Active TSS ZNF genes & repeats | TF binding regionCpG islandChromatin interactive regionlncRNA | 6 gene(s) | inside rSNPs | diseases |
| No data |
Chromatin state (count:0 , 50 per page) page:
| No data |
