Variant report

rSNPs within LD-proxies of this variant (count:23)

rs_ID	r²[population]
rs1343413	1.00[ASW][hapmap];0.93[LWK][hapmap];1.00[MEX][hapmap];0.95[MKK][hapmap];1.00[YRI][hapmap]
rs1419135	1.00[ASW][hapmap];0.93[LWK][hapmap];1.00[MEX][hapmap];0.95[MKK][hapmap];1.00[YRI][hapmap]
rs1419137	1.00[ASW][hapmap];0.95[MKK][hapmap];1.00[YRI][hapmap]
rs1578841	1.00[ASW][hapmap];0.86[LWK][hapmap];0.95[MKK][hapmap];1.00[YRI][hapmap]
rs16984595	1.00[MEX][hapmap]
rs17003888	1.00[YRI][hapmap]
rs2051097	1.00[ASW][hapmap];0.86[LWK][hapmap];0.95[MKK][hapmap];1.00[YRI][hapmap]
rs2145183	0.84[LWK][hapmap];0.95[MKK][hapmap];0.94[YRI][hapmap]
rs2145184	1.00[YRI][hapmap]
rs41529555	1.00[ASW][hapmap];0.86[LWK][hapmap];0.95[MKK][hapmap];1.00[YRI][hapmap]
rs4354446	1.00[ASW][hapmap];0.93[LWK][hapmap];1.00[MEX][hapmap];0.95[MKK][hapmap];1.00[YRI][hapmap]
rs4826909	1.00[ASW][hapmap];0.93[LWK][hapmap];1.00[MEX][hapmap];0.95[MKK][hapmap];1.00[YRI][hapmap]
rs5917175	1.00[ASW][hapmap];0.86[LWK][hapmap];0.90[MKK][hapmap];1.00[YRI][hapmap]
rs5917179	1.00[ASW][hapmap];0.93[LWK][hapmap];1.00[MEX][hapmap];0.95[MKK][hapmap];1.00[YRI][hapmap]
rs5962437	1.00[GIH][hapmap];1.00[MEX][hapmap]
rs5962441	1.00[GIH][hapmap]
rs5962960	1.00[GIH][hapmap];1.00[MEX][hapmap]
rs5962965	1.00[GIH][hapmap];1.00[MEX][hapmap]
rs5962969	1.00[GIH][hapmap]
rs6621876	1.00[ASW][hapmap];0.93[LWK][hapmap];1.00[MEX][hapmap];0.95[MKK][hapmap];1.00[YRI][hapmap]
rs6652900	1.00[GIH][hapmap];1.00[MEX][hapmap]
rs7879244	1.00[GIH][hapmap]
rs7889721	1.00[YRI][hapmap]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv916408	chrX:103552340-104347979	Bivalent/Poised TSS Enhancers Weak transcription Flanking Bivalent TSS/Enh Active TSS Bivalent Enhancer Flanking Active TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	6 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:6 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chrX:104055600-104057200	Enhancers	HUES48 Cell Line	embryonic stem cell
2	chrX:104055800-104057000	Enhancers	iPS-18 Cell Line	embryonic stem cell
3	chrX:104055800-104057200	Enhancers	ES-I3 Cell Line	embryonic stem cell
4	chrX:104056000-104057000	Enhancers	HUES64 Cell Line	embryonic stem cell
5	chrX:104056000-104057200	Enhancers	HUES6 Cell Line	embryonic stem cell
6	chrX:104056200-104057200	Enhancers	iPS-15b Cell Line	embryonic stem cell

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