Variant report

Variant	rs7893631
Chromosome Location	chr10:118206076-118206077
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 12 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:11)

rs_ID	r²[population]
rs10736250	1.00[EUR][1000 genomes]
rs10749216	1.00[EUR][1000 genomes]
rs11814907	1.00[EUR][1000 genomes]
rs11817119	1.00[EUR][1000 genomes]
rs11819366	1.00[EUR][1000 genomes]
rs12241344	1.00[EUR][1000 genomes]
rs12241434	1.00[AMR][1000 genomes]
rs34121473	1.00[AMR][1000 genomes]
rs7083636	1.00[EUR][1000 genomes]
rs7902488	1.00[EUR][1000 genomes]
rs7916528	1.00[AMR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv832001	chr10:118138370-118315059	Enhancers Weak transcription ZNF genes & repeats Flanking Active TSS Strong transcription Active TSS Transcr. at gene 5' and 3' Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	7 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:6 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr10:118191600-118216200	Weak transcription	Pancreas	Pancrea
2	chr10:118202000-118207000	Strong transcription	HMEC	breast
3	chr10:118202000-118225400	Strong transcription	Foreskin Keratinocyte Primary Cells skin03	Skin
4	chr10:118202200-118224000	Strong transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
5	chr10:118202600-118212600	Strong transcription	NHEK	skin
6	chr10:118203600-118207400	Strong transcription	Foreskin Keratinocyte Primary Cells skin02	Skin

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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