The 2.0 version of rSNPBase

Variant report

Variant rs7906230
Chromosome Location chr10:24839252-24839253
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:64 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr10:24808600-24841600 Weak transcription ES-WA7 Cell Line embryonic stem cell
2 chr10:24809200-24845400 Weak transcription Brain Substantia Nigra brain
3 chr10:24819400-24839400 Strong transcription Left Ventricle heart
4 chr10:24822400-24841200 Weak transcription Small Intestine intestine
5 chr10:24822600-24843400 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
6 chr10:24822800-24840200 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
7 chr10:24822800-24840400 Weak transcription Cortex derived primary cultured neurospheres brain
8 chr10:24823200-24840000 Weak transcription iPS-18 Cell Line embryonic stem cell
9 chr10:24823400-24840200 Weak transcription Placenta Placenta
10 chr10:24823400-24841800 Weak transcription H9 Cell Line embryonic stem cell
11 chr10:24827200-24840000 Weak transcription HUES48 Cell Line embryonic stem cell
12 chr10:24828800-24839400 Weak transcription HSMMtube muscle
13 chr10:24829000-24845000 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
14 chr10:24831000-24840600 Weak transcription Stomach Mucosa stomach
15 chr10:24831400-24840000 Weak transcription ES-I3 Cell Line embryonic stem cell
16 chr10:24832000-24841200 Weak transcription Colonic Mucosa Colon
17 chr10:24832400-24843200 Weak transcription Psoas Muscle Psoas
18 chr10:24833600-24839600 Weak transcription Stomach Smooth Muscle stomach
19 chr10:24834600-24842200 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
20 chr10:24835000-24840400 Weak transcription Rectal Mucosa Donor 29 rectum
21 chr10:24835000-24842200 Weak transcription HepG2 liver
22 chr10:24835000-24845800 Weak transcription Right Ventricle heart
23 chr10:24835200-24839800 Weak transcription Fetal Muscle Trunk muscle
24 chr10:24835200-24839800 Weak transcription Gastric stomach
25 chr10:24835200-24840000 Weak transcription iPS-20b Cell Line embryonic stem cell
26 chr10:24835200-24840000 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
27 chr10:24835200-24840000 Weak transcription Fetal Lung lung
28 chr10:24835200-24840200 Weak transcription NHEK skin
29 chr10:24835200-24840400 Weak transcription H1 Cell Line embryonic stem cell
30 chr10:24835200-24840400 Weak transcription HUES64 Cell Line embryonic stem cell
31 chr10:24835200-24840400 Weak transcription Esophagus oesophagus
32 chr10:24835200-24840600 Weak transcription Sigmoid Colon Sigmoid Colon
33 chr10:24835200-24840800 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
34 chr10:24835200-24840800 Weak transcription Fetal Adrenal Gland Adrenal Gland
35 chr10:24835200-24841200 Weak transcription Pancreas Pancrea
36 chr10:24835200-24841400 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
37 chr10:24835200-24841600 Weak transcription Duodenum Smooth Muscle Duodenum
38 chr10:24835200-24842800 Weak transcription Fetal Kidney kidney
39 chr10:24835200-24843200 Weak transcription Fetal Muscle Leg muscle
40 chr10:24835200-24845200 Weak transcription Spleen Spleen
41 chr10:24835200-24845600 Weak transcription Ovary ovary
42 chr10:24835200-24845800 Weak transcription Lung lung
43 chr10:24835400-24839800 Weak transcription HUES6 Cell Line embryonic stem cell
44 chr10:24835400-24840000 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
45 chr10:24835600-24840200 Weak transcription Rectal Mucosa Donor 31 rectum
46 chr10:24835600-24840400 Weak transcription HMEC breast
47 chr10:24835600-24840600 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
48 chr10:24835600-24841800 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
49 chr10:24835600-24845600 Weak transcription NH-A brain
50 chr10:24835800-24839800 Weak transcription Adipose Nuclei Adipose

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Last update: Aug 31, 2015