Variant report

Variant	rs7924051
Chromosome Location	chr10:26328866-26328867
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 8 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:7)

rs_ID	r²[population]
rs11014842	0.83[AMR][1000 genomes]
rs16926470	0.85[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs16926523	0.85[AFR][1000 genomes]
rs7085234	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs7085573	0.93[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs7896526	0.87[YRI][hapmap];0.96[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs7902041	1.00[AMR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv1792417	chr10:26263695-26395038	Strong transcription Enhancers Weak transcription ZNF genes & repeats Genic enhancers Flanking Active TSS	Chromatin interactive region	n/a	inside rSNPs	diseases

No data

Chromatin state (count:2 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr10:26327000-26332000	Weak transcription	Pancreatic Islets	Pancreatic Islet
2	chr10:26327600-26336800	Weak transcription	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived

Quick Search:

Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

what's new

Quick links