Variant report

Variant	rs7926626
Chromosome Location	chr11:8034242-8034243
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 9 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:8)

rs_ID	r²[population]
rs10769863	1.00[EUR][1000 genomes]
rs12574950	1.00[EUR][1000 genomes]
rs4375428	0.91[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs4514405	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs56395552	1.00[EUR][1000 genomes]
rs60024227	1.00[EUR][1000 genomes]
rs7107979	0.97[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs73396713	1.00[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1052808	chr11:8011647-8129191	Bivalent Enhancer Strong transcription Active TSS Weak transcription Flanking Bivalent TSS/Enh Enhancers Bivalent/Poised TSS Genic enhancers Flanking Active TSS ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	11 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:17 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr11:8022200-8037200	Weak transcription	HMEC	breast
2	chr11:8033000-8034400	Enhancers	Muscle Satellite Cultured Cells	--
3	chr11:8033000-8034400	Enhancers	HSMM	muscle
4	chr11:8033000-8034400	Enhancers	HSMMtube	muscle
5	chr11:8033000-8034600	Enhancers	Foreskin Fibroblast Primary Cells skin01	Skin
6	chr11:8033000-8034600	Enhancers	NH-A	brain
7	chr11:8033000-8034600	Enhancers	NHDF-Ad	bronchial
8	chr11:8033000-8034600	Enhancers	Osteobl	bone
9	chr11:8033200-8034400	Enhancers	IMR90 fetal lung fibroblasts Cell Line	lung
10	chr11:8033200-8034400	Enhancers	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
11	chr11:8033200-8034400	Enhancers	NHLF	lung
12	chr11:8033200-8034600	Enhancers	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
13	chr11:8033400-8034400	Enhancers	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
14	chr11:8033600-8034400	Enhancers	H1 Derived Mesenchymal Stem Cells	ES cell derived
15	chr11:8033600-8034400	Enhancers	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
16	chr11:8034000-8034400	Flanking Active TSS	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
17	chr11:8034000-8034400	Enhancers	Right Atrium	heart

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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