Variant report

Variant	rs7936312
Chromosome Location	chr11:76293726-76293727
allele	G/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 13 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:12)

rs_ID	r²[population]
rs10160518	0.87[EUR][1000 genomes]
rs11236791	0.83[AMR][1000 genomes];0.90[EUR][1000 genomes]
rs11236797	0.83[AMR][1000 genomes];0.90[EUR][1000 genomes]
rs2155219	0.86[EUR][1000 genomes]
rs2212434	0.84[EUR][1000 genomes]
rs4494327	0.80[AMR][1000 genomes];0.84[EUR][1000 genomes]
rs61893460	0.83[AMR][1000 genomes];0.88[EUR][1000 genomes]
rs7110818	0.83[AMR][1000 genomes];0.88[EUR][1000 genomes]
rs7114362	0.85[AMR][1000 genomes];0.81[ASN][1000 genomes]
rs7126418	0.83[AMR][1000 genomes];0.88[EUR][1000 genomes]
rs7936323	0.93[AFR][1000 genomes];0.95[AMR][1000 genomes];0.96[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs7936434	0.86[AFR][1000 genomes];0.88[AMR][1000 genomes];0.87[EUR][1000 genomes];0.85[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv518717	chr11:76288937-76310976	Enhancers Weak transcription Flanking Active TSS Bivalent Enhancer Active TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region	3 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:4 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr11:76291200-76299200	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
2	chr11:76291600-76294200	Weak transcription	HUES6 Cell Line	embryonic stem cell
3	chr11:76291600-76299800	Weak transcription	Lung	lung
4	chr11:76292400-76294600	Weak transcription	Stomach Smooth Muscle	stomach

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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