Variant report

Variant	rs7938066
Chromosome Location	chr11:75433818-75433819
allele	G/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr11:75427256..75429895-chr11:75431498..75434297,2	K562	blood:

Variant related genes	Relation type
ENSG00000166391	Chromatin interaction

Extended variants
information (count: 4 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:2)

rs_ID	r²[population]
rs12792816	0.83[EUR][1000 genomes]
rs61329757	0.86[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv3381903	chr11:75123498-75587233	Bivalent Enhancer Strong transcription Enhancers Bivalent/Poised TSS Genic enhancers Weak transcription ZNF genes & repeats Flanking Active TSS Active TSS Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	81 gene(s)	inside rSNPs	diseases
2	nsv897924	chr11:75424546-75678647	Enhancers Weak transcription Flanking Bivalent TSS/Enh Flanking Active TSS Genic enhancers Active TSS Strong transcription Bivalent/Poised TSS Bivalent Enhancer ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	37 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:26 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr11:75429600-75439600	Weak transcription	Fetal Stomach	stomach
2	chr11:75429800-75436800	Weak transcription	Right Atrium	heart
3	chr11:75430200-75436800	Weak transcription	Right Ventricle	heart
4	chr11:75430400-75434800	Weak transcription	Fetal Heart	heart
5	chr11:75431000-75439800	Weak transcription	Skeletal Muscle Male	skeletal muscle
6	chr11:75431200-75434000	Transcr. at gene 5' and 3'	Fetal Intestine Small	intestine
7	chr11:75431200-75436800	Weak transcription	Left Ventricle	heart
8	chr11:75431200-75437000	Weak transcription	Rectal Smooth Muscle	rectum
9	chr11:75432600-75434000	Enhancers	Adipose Nuclei	Adipose
10	chr11:75432600-75434000	Flanking Active TSS	Liver	Liver
11	chr11:75432600-75434000	Flanking Active TSS	HepG2	liver
12	chr11:75432600-75435200	Enhancers	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
13	chr11:75432800-75434000	Flanking Active TSS	Duodenum Mucosa	Duodenum
14	chr11:75432800-75434000	Bivalent Enhancer	Fetal Muscle Trunk	muscle
15	chr11:75432800-75434000	Enhancers	Fetal Thymus	thymus
16	chr11:75433200-75434800	Enhancers	Colonic Mucosa	Colon
17	chr11:75433200-75443200	Weak transcription	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
18	chr11:75433600-75434000	Flanking Active TSS	Spleen	Spleen
19	chr11:75433600-75435000	Enhancers	Fetal Intestine Large	intestine
20	chr11:75433600-75435200	Strong transcription	Sigmoid Colon	Sigmoid Colon
21	chr11:75433800-75434000	Genic enhancers	Rectal Mucosa Donor 31	rectum
22	chr11:75433800-75434400	Genic enhancers	Rectal Mucosa Donor 29	rectum
23	chr11:75433800-75434400	Enhancers	GM12878-XiMat	blood
24	chr11:75433800-75434600	Weak transcription	HMEC	breast
25	chr11:75433800-75434800	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
26	chr11:75433800-75439600	Weak transcription	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived

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