Variant report

Variant	rs7951357
Chromosome Location	chr11:86084909-86084910
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 19 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:19)

rs_ID	r²[population]
rs10160253	0.87[ASN][1000 genomes]
rs11234604	0.83[CHD][hapmap];0.89[JPT][hapmap];0.81[TSI][hapmap]
rs11820048	0.83[CHD][hapmap];0.89[JPT][hapmap]
rs11822824	0.85[CHB][hapmap];0.90[JPT][hapmap];0.81[TSI][hapmap]
rs11823516	0.89[JPT][hapmap]
rs11825208	0.89[JPT][hapmap]
rs11827234	0.81[ASN][1000 genomes]
rs12286147	0.97[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2167611	0.83[CHD][hapmap]
rs3758879	0.89[JPT][hapmap]
rs57985308	0.97[ASN][1000 genomes]
rs7106523	1.00[CHB][hapmap];1.00[JPT][hapmap];0.85[YRI][hapmap];1.00[ASN][1000 genomes]
rs7115858	0.83[CHD][hapmap];0.89[JPT][hapmap]
rs7924368	1.00[JPT][hapmap]
rs7931249	0.83[CHD][hapmap];0.89[JPT][hapmap];0.81[TSI][hapmap]
rs7934320	0.83[CHD][hapmap]
rs7938093	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7951433	0.85[ASW][hapmap];0.86[CHB][hapmap];1.00[CHD][hapmap];0.90[JPT][hapmap];0.88[LWK][hapmap];0.91[MKK][hapmap];1.00[YRI][hapmap];0.90[AFR][1000 genomes];1.00[ASN][1000 genomes]
rs7951478	0.85[CHB][hapmap];1.00[JPT][hapmap]

No data

Chromatin state (count:14 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr11:86082400-86085400	Weak transcription	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
2	chr11:86083000-86085000	Weak transcription	HUVEC	blood vessel
3	chr11:86083000-86085400	Weak transcription	Primary monocytes fromperipheralblood	blood
4	chr11:86083000-86085600	Weak transcription	Fetal Brain Female	brain
5	chr11:86083000-86085600	Weak transcription	Placenta Amnion	Placenta Amnion
6	chr11:86083000-86085800	Weak transcription	Esophagus	oesophagus
7	chr11:86083200-86085600	Weak transcription	Foreskin Fibroblast Primary Cells skin01	Skin
8	chr11:86084000-86085000	Weak transcription	Foreskin Keratinocyte Primary Cells skin02	Skin
9	chr11:86084000-86085200	Weak transcription	Foreskin Keratinocyte Primary Cells skin03	Skin
10	chr11:86084400-86085400	Enhancers	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
11	chr11:86084400-86089200	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
12	chr11:86084600-86085200	Enhancers	H9 Derived Neuron Cultured Cells	ES cell derived
13	chr11:86084600-86085200	Weak transcription	Fetal Heart	heart
14	chr11:86084800-86085400	Enhancers	NHEK	skin

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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