The 2.0 version of rSNPBase

Variant report

Variant rs7953229
Chromosome Location chr12:44239350-44239351
allele A/T
Outlinks Ensembl   UCSC
Chromatin state (count:46 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr12:44230400-44243800 Weak transcription Sigmoid Colon Sigmoid Colon
2 chr12:44230400-44244200 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
3 chr12:44230400-44250800 Weak transcription Gastric stomach
4 chr12:44230600-44241200 Weak transcription Primary Natural Killer cells fromperipheralblood blood
5 chr12:44230800-44241200 Weak transcription Placenta Placenta
6 chr12:44230800-44243800 Weak transcription Ovary ovary
7 chr12:44230800-44250800 Weak transcription Pancreas Pancrea
8 chr12:44230800-44254800 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
9 chr12:44230800-44260200 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
10 chr12:44231000-44240200 Weak transcription Hela-S3 cervix
11 chr12:44231000-44240800 Weak transcription Primary B cells from peripheral blood blood
12 chr12:44231000-44241200 Weak transcription Primary T killer naive cells fromperipheralblood blood
13 chr12:44231000-44242800 Weak transcription Colon Smooth Muscle Colon
14 chr12:44231000-44245800 Weak transcription Adipose Nuclei Adipose
15 chr12:44231000-44245800 Weak transcription Rectal Mucosa Donor 29 rectum
16 chr12:44231000-44249800 Weak transcription Duodenum Mucosa Duodenum
17 chr12:44231000-44251800 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
18 chr12:44231000-44252200 Weak transcription Rectal Smooth Muscle rectum
19 chr12:44231000-44254600 Weak transcription GM12878-XiMat blood
20 chr12:44231200-44261600 Weak transcription Duodenum Smooth Muscle Duodenum
21 chr12:44231400-44245800 Weak transcription Primary T cells fromperipheralblood blood
22 chr12:44231400-44245800 Weak transcription Liver Liver
23 chr12:44231800-44241000 Weak transcription Fetal Intestine Small intestine
24 chr12:44232200-44239600 Weak transcription Brain Angular Gyrus brain
25 chr12:44232200-44240200 Weak transcription HMEC breast
26 chr12:44233400-44254400 Weak transcription Left Ventricle heart
27 chr12:44233600-44251200 Weak transcription Breast Myoepithelial Primary Cells Breast
28 chr12:44234200-44254000 Weak transcription Primary B cells from cord blood blood
29 chr12:44234600-44260000 Weak transcription Psoas Muscle Psoas
30 chr12:44235600-44241200 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
31 chr12:44235800-44240800 Weak transcription HSMM muscle
32 chr12:44235800-44241200 Weak transcription NHDF-Ad bronchial
33 chr12:44236000-44240800 Weak transcription HSMMtube muscle
34 chr12:44236000-44241000 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
35 chr12:44236200-44241000 Weak transcription Osteobl bone
36 chr12:44236200-44241200 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
37 chr12:44236400-44241200 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
38 chr12:44237800-44241000 Strong transcription Foreskin Melanocyte Primary Cells skin03 Skin
39 chr12:44237800-44254200 Weak transcription Small Intestine intestine
40 chr12:44238600-44240400 Strong transcription Fetal Intestine Large intestine
41 chr12:44238600-44240400 Strong transcription Rectal Mucosa Donor 31 rectum
42 chr12:44238800-44246000 Weak transcription Primary hematopoietic stem cells blood
43 chr12:44239000-44240400 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
44 chr12:44239000-44240800 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
45 chr12:44239200-44240400 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
46 chr12:44239200-44240800 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin

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Last update: Aug 31, 2015