The 2.0 version of rSNPBase

Variant report

Variant rs7974554
Chromosome Location chr12:9853569-9853570
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:42 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr12:9826800-9854400 Weak transcription Esophagus oesophagus
2 chr12:9838800-9854400 Weak transcription Spleen Spleen
3 chr12:9839000-9854400 Weak transcription Lung lung
4 chr12:9839400-9854600 Weak transcription Small Intestine intestine
5 chr12:9840600-9864600 Weak transcription Placenta Amnion Placenta Amnion
6 chr12:9841800-9854800 Weak transcription Right Ventricle heart
7 chr12:9841800-9863200 Weak transcription HSMMtube muscle
8 chr12:9844200-9860600 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
9 chr12:9847600-9860000 Weak transcription Skeletal Muscle Female skeletal muscle
10 chr12:9848200-9860200 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
11 chr12:9848400-9854000 Weak transcription Sigmoid Colon Sigmoid Colon
12 chr12:9848400-9860200 Weak transcription Duodenum Mucosa Duodenum
13 chr12:9848600-9859400 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
14 chr12:9849400-9854000 Weak transcription Thymus Thymus
15 chr12:9849800-9854000 Weak transcription Fetal Thymus thymus
16 chr12:9849800-9860600 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
17 chr12:9850000-9854400 Weak transcription Left Ventricle heart
18 chr12:9850200-9854200 Weak transcription Primary Natural Killer cells fromperipheralblood blood
19 chr12:9850400-9854400 Weak transcription Primary hematopoietic stem cells blood
20 chr12:9850400-9854600 Enhancers Primary T helper memory cells from peripheral blood 2 blood
21 chr12:9851200-9854600 Enhancers Primary T killer memory cells from peripheral blood blood
22 chr12:9851400-9854400 Enhancers Primary T cells from cord blood blood
23 chr12:9851800-9853600 Enhancers HUVEC blood vessel
24 chr12:9852200-9854200 Enhancers Primary T helper naive cells from peripheral blood blood
25 chr12:9852200-9854400 Enhancers Primary T helper naive cells fromperipheralblood blood
26 chr12:9852200-9856400 Enhancers Primary B cells from peripheral blood blood
27 chr12:9852400-9855000 Enhancers Primary T helper memory cells from peripheral blood 1 blood
28 chr12:9852400-9855600 Enhancers Primary T regulatory cells fromperipheralblood blood
29 chr12:9852600-9856600 Enhancers Primary T helper cells fromperipheralblood blood
30 chr12:9853000-9854600 Enhancers Primary T helper 17 cells PMA-I stimulated --
31 chr12:9853000-9856200 Enhancers Primary B cells from cord blood blood
32 chr12:9853200-9853600 Flanking Active TSS Primary T helper cells PMA-I stimulated --
33 chr12:9853200-9853800 Flanking Active TSS Fetal Heart heart
34 chr12:9853200-9854200 Weak transcription Primary hematopoietic stem cells short term culture blood
35 chr12:9853200-9854400 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
36 chr12:9853200-9854400 Enhancers Dnd41 blood
37 chr12:9853200-9854600 Enhancers Primary T killer naive cells fromperipheralblood blood
38 chr12:9853200-9854600 Enhancers GM12878-XiMat blood
39 chr12:9853400-9853800 Weak transcription Primary T cells fromperipheralblood blood
40 chr12:9853400-9854400 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
41 chr12:9853400-9858400 Weak transcription Primary monocytes fromperipheralblood blood
42 chr12:9853400-9858400 Weak transcription Monocytes-CD14+_RO01746 blood

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Last update: Aug 31, 2015