The 2.0 version of rSNPBase

Variant report

Variant rs34201389
Chromosome Location chr12:9885840-9885841
allele A/T
Outlinks Ensembl   UCSC
Chromatin state (count:25 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr12:9878600-9886000 Active TSS GM12878-XiMat blood
2 chr12:9883200-9886000 Active TSS Primary Natural Killer cells fromperipheralblood blood
3 chr12:9883400-9886000 Active TSS Rectal Mucosa Donor 29 rectum
4 chr12:9884000-9886000 Flanking Active TSS Primary B cells from cord blood blood
5 chr12:9884800-9886000 Flanking Active TSS Primary monocytes fromperipheralblood blood
6 chr12:9884800-9886000 Flanking Active TSS Primary B cells from peripheral blood blood
7 chr12:9884800-9886800 Flanking Active TSS Monocytes-CD14+_RO01746 blood
8 chr12:9884800-9887200 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Female --
9 chr12:9885000-9892000 Enhancers Primary hematopoietic stem cells blood
10 chr12:9885400-9886000 Enhancers Primary T cells effector/memory enriched fromperipheralblood blood
11 chr12:9885600-9886000 Enhancers Primary T regulatory cells fromperipheralblood blood
12 chr12:9885600-9886200 Enhancers Primary T cells from cord blood blood
13 chr12:9885600-9886200 Enhancers Primary T helper naive cells fromperipheralblood blood
14 chr12:9885600-9886200 Enhancers Primary T helper 17 cells PMA-I stimulated --
15 chr12:9885600-9886200 Enhancers Primary T helper cells fromperipheralblood blood
16 chr12:9885800-9886000 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Male --
17 chr12:9885800-9886200 Enhancers Primary T helper memory cells from peripheral blood 1 blood
18 chr12:9885800-9886200 Enhancers Primary T killer memory cells from peripheral blood blood
19 chr12:9885800-9886600 Enhancers Primary T helper memory cells from peripheral blood 2 blood
20 chr12:9885800-9886800 Enhancers Primary T helper cells PMA-I stimulated --
21 chr12:9885800-9889200 Weak transcription Primary T killer naive cells fromperipheralblood blood
22 chr12:9885800-9889400 Weak transcription Primary mononuclear cells fromperipheralblood Blood
23 chr12:9885800-9889600 Weak transcription Rectal Mucosa Donor 31 rectum
24 chr12:9885800-9890600 Weak transcription Primary T cells fromperipheralblood blood
25 chr12:9885800-9892400 Enhancers Primary hematopoietic stem cells short term culture blood

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Last update: Aug 31, 2015