Variant report

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr12:47357087..47358718-chr12:47360660..47362263,2	K562	blood:
2	chr12:47358592..47362292-chr12:47362397..47365162,3	K562	blood:

rSNPs within LD-proxies of this variant (count:26)

rs_ID	r²[population]
rs10881039	0.81[EUR][1000 genomes]
rs11183644	0.80[AFR][1000 genomes]
rs11183661	0.93[JPT][hapmap];0.95[AFR][1000 genomes]
rs11183677	0.99[AMR][1000 genomes];0.98[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs11183699	1.00[CEU][hapmap];0.86[EUR][1000 genomes]
rs11183710	0.85[EUR][1000 genomes]
rs11183711	0.86[EUR][1000 genomes]
rs17684703	1.00[YRI][hapmap]
rs1986584	0.85[AFR][1000 genomes]
rs1989912	0.90[EUR][1000 genomes]
rs2250595	0.83[AMR][1000 genomes];0.86[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs2253630	0.81[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs2465627	0.81[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs2465628	0.81[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs2465630	0.81[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs4405401	0.95[AFR][1000 genomes]
rs4768770	0.84[EUR][1000 genomes]
rs7134654	0.84[EUR][1000 genomes]
rs7137808	0.95[AFR][1000 genomes]
rs7956438	0.84[EUR][1000 genomes]
rs7958568	0.96[CEU][hapmap];0.83[EUR][1000 genomes]
rs7962539	1.00[AFR][1000 genomes];0.80[AMR][1000 genomes];0.86[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs7971310	1.00[CEU][hapmap];0.83[EUR][1000 genomes]
rs7971796	0.83[EUR][1000 genomes]
rs7972871	0.85[AFR][1000 genomes];0.89[EUR][1000 genomes]
rs7975211	0.95[AFR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv1845143	chr12:47051076-47431496	Enhancers Weak transcription Bivalent/Poised TSS Flanking Active TSS Flanking Bivalent TSS/Enh Genic enhancers Bivalent Enhancer ZNF genes & repeats Active TSS Strong transcription Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	14 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:5 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr12:47359800-47377400	Weak transcription	Muscle Satellite Cultured Cells	--
2	chr12:47360000-47365200	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
3	chr12:47360000-47375000	Weak transcription	Foreskin Keratinocyte Primary Cells skin03	Skin
4	chr12:47360400-47363400	Weak transcription	Psoas Muscle	Psoas
5	chr12:47360400-47364600	Weak transcription	Fetal Heart	heart

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