The 2.0 version of rSNPBase

Variant report

Variant rs7979773
Chromosome Location chr12:25475778-25475779
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:39 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr12:25472600-25477000 Enhancers Primary hematopoietic stem cells short term culture blood
2 chr12:25473800-25475800 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
3 chr12:25473800-25478600 Enhancers Primary T killer naive cells fromperipheralblood blood
4 chr12:25474600-25476600 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
5 chr12:25474600-25477400 Enhancers Fetal Thymus thymus
6 chr12:25474800-25477600 Enhancers Primary T helper memory cells from peripheral blood 2 blood
7 chr12:25475000-25476600 Weak transcription Fetal Heart heart
8 chr12:25475200-25476000 Flanking Active TSS Primary T helper naive cells from peripheral blood blood
9 chr12:25475200-25476000 Flanking Active TSS Primary T killer memory cells from peripheral blood blood
10 chr12:25475200-25476800 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Male --
11 chr12:25475200-25476800 Enhancers HUVEC blood vessel
12 chr12:25475400-25475800 Flanking Active TSS Primary T helper cells fromperipheralblood blood
13 chr12:25475400-25475800 Flanking Active TSS GM12878-XiMat blood
14 chr12:25475400-25476000 Flanking Active TSS Primary T cells from cord blood blood
15 chr12:25475400-25476000 Flanking Active TSS Primary T cells fromperipheralblood blood
16 chr12:25475400-25476000 Flanking Active TSS Primary T helper naive cells fromperipheralblood blood
17 chr12:25475400-25476000 Flanking Active TSS Primary T helper 17 cells PMA-I stimulated --
18 chr12:25475400-25476000 Enhancers Sigmoid Colon Sigmoid Colon
19 chr12:25475400-25476200 Enhancers Primary B cells from peripheral blood blood
20 chr12:25475400-25477000 Flanking Active TSS Primary T helper cells PMA-I stimulated --
21 chr12:25475400-25477000 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Female --
22 chr12:25475400-25477000 Enhancers Primary mononuclear cells fromperipheralblood Blood
23 chr12:25475400-25477400 Enhancers Thymus Thymus
24 chr12:25475400-25477400 Enhancers NH-A brain
25 chr12:25475600-25475800 Enhancers Primary B cells from cord blood blood
26 chr12:25475600-25475800 Enhancers Primary hematopoietic stem cells blood
27 chr12:25475600-25475800 Enhancers Foreskin Keratinocyte Primary Cells skin03 Skin
28 chr12:25475600-25476000 Enhancers Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
29 chr12:25475600-25476000 Flanking Active TSS Primary T helper memory cells from peripheral blood 1 blood
30 chr12:25475600-25476000 Flanking Active TSS Primary T regulatory cells fromperipheralblood blood
31 chr12:25475600-25476000 Enhancers Rectal Mucosa Donor 31 rectum
32 chr12:25475600-25476200 Enhancers Hela-S3 cervix
33 chr12:25475600-25476200 Enhancers HMEC breast
34 chr12:25475600-25476800 Enhancers HUES6 Cell Line embryonic stem cell
35 chr12:25475600-25477000 Enhancers Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
36 chr12:25475600-25477000 Enhancers Fetal Adrenal Gland Adrenal Gland
37 chr12:25475600-25477000 Enhancers Osteobl bone
38 chr12:25475600-25477400 Enhancers Fetal Lung lung
39 chr12:25475600-25478000 Enhancers Primary Natural Killer cells fromperipheralblood blood

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Last update: Aug 31, 2015