Variant report
Variant | rs7981515 |
---|---|
Chromosome Location | chr13:92523014-92523015 |
allele | G/T |
Outlinks | Ensembl   UCSC |
- TF binding region (count:0)
- CpG islands (count:0)
- Chromatin interactive region (count:0)
- LncRNA region (count:0)
- Mature miRNA region (count: 0)
- miRNA target sites (count:0)
No data |
No data |
No data |
No data |
No data |
No data |
No data |
rs_ID | r2[population] |
---|---|
rs11839974 | 0.89[CEU][hapmap];1.00[JPT][hapmap];0.81[AMR][1000 genomes];0.94[EUR][1000 genomes];0.90[ASN][1000 genomes] |
rs11841339 | 0.81[AMR][1000 genomes];0.91[EUR][1000 genomes] |
rs16946808 | 0.81[AMR][1000 genomes];0.91[EUR][1000 genomes];0.86[ASN][1000 genomes] |
rs16946850 | 0.89[CEU][hapmap] |
rs16951984 | 0.81[AMR][1000 genomes];0.94[EUR][1000 genomes];0.90[ASN][1000 genomes] |
rs1854974 | 0.81[AMR][1000 genomes];0.94[EUR][1000 genomes];0.90[ASN][1000 genomes] |
rs2989989 | 0.84[JPT][hapmap];0.81[YRI][hapmap] |
rs472095 | 0.84[JPT][hapmap] |
rs505246 | 0.85[JPT][hapmap] |
rs58927889 | 0.85[ASN][1000 genomes] |
rs61966376 | 0.85[ASN][1000 genomes] |
rs61966377 | 0.85[ASN][1000 genomes] |
rs61967084 | 0.81[AMR][1000 genomes];0.91[EUR][1000 genomes];0.90[ASN][1000 genomes] |
rs61967085 | 0.81[AMR][1000 genomes];0.94[EUR][1000 genomes];0.90[ASN][1000 genomes] |
rs6492561 | 0.89[CEU][hapmap] |
rs7328464 | 0.89[CEU][hapmap] |
rs7331895 | 0.80[EUR][1000 genomes] |
rs7993634 | 1.00[JPT][hapmap];0.85[ASN][1000 genomes] |
rs7996272 | 0.84[JPT][hapmap];0.86[YRI][hapmap] |
rs8001076 | 0.81[AMR][1000 genomes];0.94[EUR][1000 genomes];0.90[ASN][1000 genomes] |

No. | Variant name | Chromosome position | Chromatin state | Related regulatory elements | Target genes | Extended variants | Associated traits |
---|---|---|---|---|---|---|---|
1 | nsv529268 | chr13:92267310-92531263 | Enhancers Weak transcription Flanking Active TSS Active TSS ZNF genes & repeats Genic enhancers Strong transcription | TF binding regionCpG islandChromatin interactive regionlncRNA | 3 gene(s) | inside rSNPs | diseases |
2 | esv3378326 | chr13:92445514-92816367 | Enhancers Weak transcription Flanking Active TSS Active TSS ZNF genes & repeats | TF binding regionCpG islandChromatin interactive regionlncRNA | 3 gene(s) | inside rSNPs | diseases |
3 | nsv562721 | chr13:92476602-92548841 | Enhancers Weak transcription | lncRNA | n/a | inside rSNPs | diseases |
4 | nsv900883 | chr13:92481236-92602622 | Enhancers Weak transcription Active TSS ZNF genes & repeats Flanking Active TSS | Chromatin interactive regionlncRNA | n/a | inside rSNPs | diseases |
5 | nsv976142 | chr13:92492782-92567759 | Weak transcription Enhancers Flanking Active TSS Active TSS | lncRNA | n/a | inside rSNPs | diseases |
No data |