Variant report

Variant	rs7993634
Chromosome Location	chr13:92545520-92545521
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 20 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:16)

rs_ID	r²[population]
rs11839974	1.00[CHB][hapmap];1.00[JPT][hapmap]
rs16946808	1.00[CHB][hapmap];0.83[CHD][hapmap];0.82[JPT][hapmap]
rs16946850	1.00[CHB][hapmap];0.83[CHD][hapmap];0.82[JPT][hapmap]
rs16951984	1.00[CHB][hapmap];0.82[JPT][hapmap]
rs1854974	1.00[CHB][hapmap];0.82[JPT][hapmap]
rs2989989	0.82[JPT][hapmap]
rs472095	0.82[JPT][hapmap]
rs505246	0.82[JPT][hapmap]
rs58927889	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs61966376	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs61966377	0.93[AFR][1000 genomes];0.89[AMR][1000 genomes];0.96[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs6492561	1.00[CHB][hapmap];0.83[CHD][hapmap];0.82[JPT][hapmap]
rs7328464	1.00[CHB][hapmap];0.83[CHD][hapmap];0.82[JPT][hapmap]
rs7330978	1.00[CHB][hapmap];0.83[CHD][hapmap];0.82[JPT][hapmap]
rs7981515	1.00[JPT][hapmap]
rs7996272	1.00[CHB][hapmap];0.82[JPT][hapmap]

Variant overlapped rSNPs/rCNVs (count:4 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv3378326	chr13:92445514-92816367	Enhancers Weak transcription Flanking Active TSS Active TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	3 gene(s)	inside rSNPs	diseases
2	nsv562721	chr13:92476602-92548841	Enhancers Weak transcription	lncRNA	n/a	inside rSNPs	diseases
3	nsv900883	chr13:92481236-92602622	Enhancers Weak transcription Active TSS ZNF genes & repeats Flanking Active TSS	Chromatin interactive region lncRNA	n/a	inside rSNPs	diseases
4	nsv976142	chr13:92492782-92567759	Weak transcription Enhancers Flanking Active TSS Active TSS	lncRNA	n/a	inside rSNPs	diseases

No data

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr13:92543600-92550400	Weak transcription	Primary hematopoietic stem cells	blood

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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