The 2.0 version of rSNPBase

Variant report

Variant rs7987688
Chromosome Location chr13:30797758-30797759
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:100 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr13:30754000-30798800 Weak transcription Brain Anterior Caudate brain
2 chr13:30765600-30807000 Weak transcription Gastric stomach
3 chr13:30766400-30804400 Weak transcription Duodenum Mucosa Duodenum
4 chr13:30768600-30798800 Weak transcription HMEC breast
5 chr13:30770000-30799200 Weak transcription HSMMtube muscle
6 chr13:30770600-30803200 Weak transcription HUES48 Cell Line embryonic stem cell
7 chr13:30774400-30812600 Weak transcription Rectal Mucosa Donor 31 rectum
8 chr13:30774600-30802800 Weak transcription Lung lung
9 chr13:30774600-30805200 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
10 chr13:30775000-30803000 Weak transcription Esophagus oesophagus
11 chr13:30777200-30799000 Weak transcription Brain Angular Gyrus brain
12 chr13:30780200-30801000 Weak transcription Pancreas Pancrea
13 chr13:30782600-30798400 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
14 chr13:30783200-30799000 Weak transcription iPS-18 Cell Line embryonic stem cell
15 chr13:30783400-30798000 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
16 chr13:30783800-30797800 Weak transcription Primary T cells from cord blood blood
17 chr13:30790000-30807000 Weak transcription Small Intestine intestine
18 chr13:30790800-30799000 Weak transcription ES-I3 Cell Line embryonic stem cell
19 chr13:30791000-30797800 Weak transcription Colonic Mucosa Colon
20 chr13:30791000-30798400 Weak transcription Right Ventricle heart
21 chr13:30791000-30799000 Weak transcription HUES64 Cell Line embryonic stem cell
22 chr13:30791000-30799000 Weak transcription iPS-20b Cell Line embryonic stem cell
23 chr13:30791000-30799000 Weak transcription Aorta Aorta
24 chr13:30791000-30799000 Weak transcription Rectal Smooth Muscle rectum
25 chr13:30791000-30802600 Weak transcription Brain Cingulate Gyrus brain
26 chr13:30791000-30802600 Weak transcription Skeletal Muscle Female skeletal muscle
27 chr13:30791000-30807200 Weak transcription H9 Cell Line embryonic stem cell
28 chr13:30791000-30808800 Weak transcription Brain Hippocampus Middle brain
29 chr13:30791000-30811600 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
30 chr13:30791000-30831400 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
31 chr13:30791200-30798800 Weak transcription Muscle Satellite Cultured Cells --
32 chr13:30792400-30802600 Weak transcription Primary T killer memory cells from peripheral blood blood
33 chr13:30794000-30801200 Weak transcription Colon Smooth Muscle Colon
34 chr13:30795000-30800000 Weak transcription Primary T helper naive cells from peripheral blood blood
35 chr13:30795200-30798000 Strong transcription NHDF-Ad bronchial
36 chr13:30795400-30799000 Strong transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
37 chr13:30795600-30798000 Weak transcription Placenta Amnion Placenta Amnion
38 chr13:30795800-30798800 Strong transcription Foreskin Keratinocyte Primary Cells skin03 Skin
39 chr13:30795800-30798800 ZNF genes & repeats Fetal Thymus thymus
40 chr13:30795800-30805600 Strong transcription Foreskin Melanocyte Primary Cells skin03 Skin
41 chr13:30796200-30797800 Strong transcription Foreskin Fibroblast Primary Cells skin02 Skin
42 chr13:30796200-30798800 Strong transcription Fetal Lung lung
43 chr13:30796200-30799400 ZNF genes & repeats Primary B cells from cord blood blood
44 chr13:30796200-30799600 ZNF genes & repeats Primary hematopoietic stem cells blood
45 chr13:30796200-30799600 ZNF genes & repeats Primary hematopoietic stem cells G-CSF-mobilized Female --
46 chr13:30796200-30800400 ZNF genes & repeats Primary hematopoietic stem cells G-CSF-mobilized Male --
47 chr13:30796400-30797800 ZNF genes & repeats Cortex derived primary cultured neurospheres brain
48 chr13:30796400-30797800 ZNF genes & repeats Adipose Nuclei Adipose
49 chr13:30796400-30799800 ZNF genes & repeats Pancreatic Islets Pancreatic Islet
50 chr13:30796400-30800000 ZNF genes & repeats hESC Derived CD184+ Endoderm Cultured Cells ES cell derived

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Last update: Aug 31, 2015