Variant report

rSNPs within LD-proxies of this variant (count:35)

rs_ID	r²[population]
rs1104351	1.00[JPT][hapmap]
rs12874522	1.00[JPT][hapmap]
rs1326137	1.00[JPT][hapmap]
rs17070931	0.83[ASN][1000 genomes]
rs1886977	1.00[JPT][hapmap]
rs2094196	1.00[JPT][hapmap]
rs2209380	0.85[AFR][1000 genomes];1.00[AMR][1000 genomes];0.92[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2406694	1.00[JPT][hapmap]
rs2897435	0.92[ASN][1000 genomes]
rs2897437	0.89[AMR][1000 genomes];0.96[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs4245345	0.89[AMR][1000 genomes];0.96[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs4941618	1.00[JPT][hapmap]
rs4942720	1.00[JPT][hapmap]
rs4942721	1.00[JPT][hapmap]
rs6561414	1.00[JPT][hapmap]
rs7322313	0.94[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs7329615	1.00[JPT][hapmap]
rs7335662	1.00[CHD][hapmap]
rs7335797	1.00[JPT][hapmap]
rs753372	1.00[CHB][hapmap];1.00[JPT][hapmap];0.92[ASN][1000 genomes]
rs7981492	1.00[CHB][hapmap]
rs7982499	0.92[ASN][1000 genomes]
rs7991892	1.00[JPT][hapmap]
rs7995548	0.89[AMR][1000 genomes];0.96[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs8001032	1.00[JPT][hapmap]
rs8002482	1.00[JPT][hapmap]
rs840429	1.00[JPT][hapmap]
rs840432	1.00[JPT][hapmap]
rs9526419	1.00[JPT][hapmap]
rs9534884	1.00[JPT][hapmap]
rs9562769	0.92[ASN][1000 genomes]
rs9567925	0.92[ASN][1000 genomes]
rs9567926	0.92[ASN][1000 genomes]
rs9567927	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];0.94[TSI][hapmap]
rs9567929	0.92[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:3 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv3510679	chr13:48236624-48498185	Enhancers Active TSS Weak transcription Flanking Active TSS ZNF genes & repeats Bivalent Enhancer Strong transcription Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA	6 gene(s)	inside rSNPs	diseases
2	esv3510680	chr13:48236624-48498185	Enhancers Weak transcription ZNF genes & repeats Flanking Active TSS Bivalent Enhancer Active TSS Strong transcription Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA	6 gene(s)	inside rSNPs	diseases
3	nsv561589	chr13:48251736-48420218	Weak transcription Enhancers Flanking Active TSS ZNF genes & repeats Active TSS Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	4 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr13:48416200-48417000	Weak transcription	Fetal Kidney	kidney

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