Variant report

rSNPs within LD-proxies of this variant (count:25)

rs_ID	r²[population]
rs1088971	0.80[ASN][1000 genomes]
rs1091544	0.84[ASN][1000 genomes]
rs1091713	0.84[ASN][1000 genomes]
rs1151556	0.84[ASN][1000 genomes]
rs1151557	0.84[ASN][1000 genomes]
rs1178939	0.89[ASN][1000 genomes]
rs1178940	0.89[ASN][1000 genomes]
rs11915632	0.84[AFR][1000 genomes]
rs11925589	0.84[AFR][1000 genomes]
rs61246679	0.84[AFR][1000 genomes]
rs73004190	0.84[AFR][1000 genomes]
rs73004200	0.84[AFR][1000 genomes]
rs800049	0.84[ASN][1000 genomes]
rs800050	0.84[ASN][1000 genomes]
rs800051	0.83[ASN][1000 genomes]
rs800053	0.83[ASN][1000 genomes]
rs800055	0.83[ASN][1000 genomes]
rs800057	0.83[ASN][1000 genomes]
rs800058	0.83[ASN][1000 genomes]
rs800062	0.80[ASN][1000 genomes]
rs800065	0.89[ASN][1000 genomes]
rs800073	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs800074	0.98[AFR][1000 genomes];1.00[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs800077	0.91[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs800099	0.81[AMR][1000 genomes];0.81[EUR][1000 genomes];0.85[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:5 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv532633	chr3:143802417-144440646	Active TSS Enhancers Weak transcription ZNF genes & repeats Flanking Active TSS Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	8 gene(s)	inside rSNPs	diseases
2	nsv591928	chr3:144050897-144822081	Enhancers Weak transcription Active TSS Bivalent Enhancer Flanking Active TSS ZNF genes & repeats	Chromatin interactive region lncRNA	3 gene(s)	inside rSNPs	diseases
3	esv3379740	chr3:144225847-144433818	Enhancers Flanking Active TSS Weak transcription Active TSS ZNF genes & repeats	Chromatin interactive region lncRNA	2 gene(s)	inside rSNPs	diseases
4	esv2757895	chr3:144236202-144391387	Enhancers Active TSS Weak transcription Flanking Active TSS ZNF genes & repeats	Chromatin interactive region lncRNA	2 gene(s)	inside rSNPs	diseases
5	esv2759185	chr3:144236202-144391387	Enhancers Weak transcription Flanking Active TSS Active TSS ZNF genes & repeats	Chromatin interactive region lncRNA	2 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:2 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr3:144345600-144346800	Weak transcription	H9 Derived Neuron Cultured Cells	ES cell derived
2	chr3:144346000-144347200	Weak transcription	Primary neutrophils fromperipheralblood	blood

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