Variant report

rSNPs within LD-proxies of this variant (count:27)

rs_ID	r²[population]
rs10130278	0.91[AMR][1000 genomes];0.86[EUR][1000 genomes]
rs10130375	0.82[AMR][1000 genomes];0.81[EUR][1000 genomes]
rs10130385	0.91[AMR][1000 genomes];0.86[EUR][1000 genomes]
rs10131325	0.81[EUR][1000 genomes]
rs10131652	0.92[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs10141239	0.81[AMR][1000 genomes]
rs10143760	0.84[AMR][1000 genomes];0.82[EUR][1000 genomes]
rs10143778	0.92[AMR][1000 genomes];0.86[EUR][1000 genomes]
rs12147858	0.87[AMR][1000 genomes];0.83[EUR][1000 genomes]
rs1951197	0.90[AMR][1000 genomes]
rs1951200	0.82[AMR][1000 genomes];0.83[EUR][1000 genomes]
rs1951201	0.82[AMR][1000 genomes];0.83[EUR][1000 genomes]
rs4332665	0.86[AMR][1000 genomes];0.86[EUR][1000 genomes]
rs4353399	0.92[AMR][1000 genomes];0.85[EUR][1000 genomes]
rs4427713	0.83[EUR][1000 genomes]
rs4433719	0.91[AMR][1000 genomes];0.85[EUR][1000 genomes]
rs4465524	0.92[AMR][1000 genomes];0.86[EUR][1000 genomes]
rs4489913	0.81[AMR][1000 genomes];0.83[EUR][1000 genomes]
rs4981155	0.92[AMR][1000 genomes];0.86[EUR][1000 genomes]
rs4981156	0.81[AMR][1000 genomes];0.83[EUR][1000 genomes]
rs4981972	0.88[AMR][1000 genomes]
rs4981973	0.82[AMR][1000 genomes];0.83[EUR][1000 genomes]
rs4981974	0.92[AMR][1000 genomes];0.86[EUR][1000 genomes]
rs7160547	0.80[EUR][1000 genomes]
rs7492909	0.92[AMR][1000 genomes];0.86[EUR][1000 genomes]
rs8004563	0.82[AFR][1000 genomes];0.87[AMR][1000 genomes];0.99[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs8004777	0.92[AMR][1000 genomes];0.86[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:4 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv2758352	chr14:32858480-33016442	Enhancers Weak transcription Flanking Active TSS Genic enhancers Bivalent Enhancer Strong transcription Transcr. at gene 5' and 3' Active TSS ZNF genes & repeats Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	4 gene(s)	inside rSNPs	diseases
2	esv2759978	chr14:32858480-33016442	Enhancers Active TSS Weak transcription Flanking Bivalent TSS/Enh Flanking Active TSS Genic enhancers ZNF genes & repeats Strong transcription Bivalent Enhancer Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	4 gene(s)	inside rSNPs	diseases
3	nsv901595	chr14:32928634-32961434	Enhancers Weak transcription Flanking Active TSS Active TSS Strong transcription ZNF genes & repeats	TF binding region CpG island Chromatin interactive region	2 gene(s)	inside rSNPs	diseases
4	nsv974324	chr14:32950342-32961052	Weak transcription Enhancers	TF binding region Chromatin interactive region	2 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:14 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr14:32947600-32962200	Weak transcription	Stomach Smooth Muscle	stomach
2	chr14:32947800-32960600	Weak transcription	Fetal Brain Male	brain
3	chr14:32947800-32963400	Weak transcription	Right Atrium	heart
4	chr14:32950800-32960600	Weak transcription	Foreskin Melanocyte Primary Cells skin01	Skin
5	chr14:32951400-32960600	Weak transcription	Left Ventricle	heart
6	chr14:32951600-32960600	Weak transcription	Brain Substantia Nigra	brain
7	chr14:32951800-32960200	Weak transcription	Fetal Heart	heart
8	chr14:32957800-32961800	Weak transcription	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
9	chr14:32957800-32963000	Weak transcription	IMR90 fetal lung fibroblasts Cell Line	lung
10	chr14:32957800-32963200	Weak transcription	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
11	chr14:32958200-32962400	Weak transcription	Right Ventricle	heart
12	chr14:32958400-32961200	Weak transcription	Muscle Satellite Cultured Cells	--
13	chr14:32958600-32962400	Weak transcription	Psoas Muscle	Psoas
14	chr14:32959000-32962600	Weak transcription	Aorta	Aorta

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