Variant report

rSNPs within LD-proxies of this variant (count:27)

rs_ID	r²[population]
rs10135007	0.84[AMR][1000 genomes];0.89[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs10137690	0.97[ASN][1000 genomes]
rs10141903	0.83[AMR][1000 genomes];0.89[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs10151312	0.82[AMR][1000 genomes];0.99[ASN][1000 genomes]
rs11159502	0.86[CEU][hapmap]
rs11159503	0.83[AMR][1000 genomes];0.96[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs11847098	0.86[CEU][hapmap]
rs11847181	0.89[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs1885599	0.95[CEU][hapmap]
rs1951605	0.87[CEU][hapmap]
rs1951609	1.00[CEU][hapmap];0.94[CHB][hapmap];1.00[JPT][hapmap];0.92[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs1951613	0.94[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs2025214	0.86[CEU][hapmap]
rs2146242	0.83[ASN][1000 genomes]
rs2146243	0.91[AMR][1000 genomes];0.96[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs2371805	0.82[AMR][1000 genomes];0.96[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs4584759	0.87[EUR][1000 genomes]
rs4903983	0.85[CEU][hapmap]
rs4903984	0.95[CEU][hapmap];0.87[EUR][1000 genomes]
rs4903985	0.90[CEU][hapmap];0.94[CHB][hapmap];1.00[JPT][hapmap];0.90[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs7140301	0.83[AMR][1000 genomes];0.99[ASN][1000 genomes]
rs7150294	0.88[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs7150676	0.82[EUR][1000 genomes]
rs7153100	0.91[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs7401055	0.81[EUR][1000 genomes]
rs8005622	0.95[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs8011278	0.95[EUR][1000 genomes];0.97[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:4 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1047694	chr14:81831147-82534026	Enhancers Weak transcription Bivalent Enhancer Flanking Bivalent TSS/Enh Strong transcription Flanking Active TSS Genic enhancers Bivalent/Poised TSS Active TSS ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	18 gene(s)	inside rSNPs	diseases
2	nsv542145	chr14:81831147-82534026	Weak transcription Active TSS Genic enhancers Enhancers Strong transcription Flanking Active TSS Bivalent Enhancer ZNF genes & repeats Bivalent/Poised TSS Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	18 gene(s)	inside rSNPs	diseases
3	nsv902120	chr14:81953242-82067555	ZNF genes & repeats Weak transcription Strong transcription Enhancers Genic enhancers Flanking Active TSS Active TSS Transcr. at gene 5' and 3' Bivalent Enhancer Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region	3 gene(s)	inside rSNPs	diseases
4	nsv565299	chr14:81983027-82586324	Enhancers Strong transcription Weak transcription Active TSS Genic enhancers Flanking Active TSS ZNF genes & repeats Bivalent Enhancer Flanking Bivalent TSS/Enh Bivalent/Poised TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	12 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:16 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr14:82024000-82029200	Weak transcription	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
2	chr14:82026000-82028200	Enhancers	HUES48 Cell Line	embryonic stem cell
3	chr14:82026400-82029200	Weak transcription	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
4	chr14:82026400-82029200	Weak transcription	iPS DF 6.9 Cell Line	embryonic stem cell
5	chr14:82026600-82030000	Enhancers	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
6	chr14:82027200-82028400	Enhancers	HUES64 Cell Line	embryonic stem cell
7	chr14:82027400-82028000	Enhancers	H9 Derived Neuron Cultured Cells	ES cell derived
8	chr14:82027400-82028200	Enhancers	H9 Cell Line	embryonic stem cell
9	chr14:82027400-82028400	Enhancers	ES-I3 Cell Line	embryonic stem cell
10	chr14:82027400-82028400	Enhancers	HUES6 Cell Line	embryonic stem cell
11	chr14:82027400-82029200	Enhancers	H1 Cell Line	embryonic stem cell
12	chr14:82027400-82030200	Enhancers	iPS-15b Cell Line	embryonic stem cell
13	chr14:82027600-82028000	Enhancers	Foreskin Keratinocyte Primary Cells skin03	Skin
14	chr14:82027600-82028800	Enhancers	iPS-18 Cell Line	embryonic stem cell
15	chr14:82027600-82029200	Weak transcription	Foreskin Keratinocyte Primary Cells skin02	Skin
16	chr14:82027800-82028400	Enhancers	iPS-20b Cell Line	embryonic stem cell

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