Variant report

Variant	rs801203
Chromosome Location	chr7:66023012-66023013
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	CTCF	chr7:66023000-66023150	GM12864	blood:	n/a	n/a
2	POLR2A	chr7:66022524-66023064	HepG2	liver:	n/a	n/a
3	MAZ	chr7:66022396-66023453	IMR90	lung:	n/a	chr7:66022977-66022987
4	RCOR1	chr7:66022373-66023110	IMR90	lung:	n/a	n/a
5	SMC3	chr7:66022492-66023064	Hela-S3	cervix:	n/a	chr7:66022519-66022533 chr7:66022519-66022529
6	SMC3	chr7:66021828-66023876	SK-N-SH	brain:	n/a	chr7:66023110-66023120 chr7:66022519-66022533 chr7:66022519-66022529 chr7:66023434-66023441
7	CTCF	chr7:66022982-66023042	MCF-7	breast:	n/a	n/a
8	CTCF	chr7:66022500-66023016	HCT-116	colon:	n/a	chr7:66022519-66022532 chr7:66022726-66022744 chr7:66022517-66022535 chr7:66022728-66022749
9	CTCF	chr7:66022425-66023092	K562	blood:	n/a	chr7:66022519-66022532 chr7:66022726-66022744 chr7:66022517-66022535 chr7:66022728-66022749
10	POLR2A	chr7:66022468-66023074	Hela-S3	cervix:	n/a	n/a
11	RAD21	chr7:66022465-66023053	A549	lung:	n/a	chr7:66022515-66022534 chr7:66022727-66022746 chr7:66022519-66022529
12	HMGN3	chr7:66022337-66023073	K562	blood:	n/a	n/a
13	CHD1	chr7:66022446-66023117	IMR90	lung:	n/a	n/a
14	RAD21	chr7:66022365-66023255	SK-N-SH	brain:	n/a	chr7:66022515-66022534 chr7:66022727-66022746 chr7:66022519-66022529
15	CTCF	chr7:66022512-66023105	GM12878	blood:	n/a	chr7:66022519-66022532 chr7:66022726-66022744 chr7:66022517-66022535 chr7:66022728-66022749
16	RAD21	chr7:66022391-66023141	HCT-116	colon:	n/a	chr7:66022515-66022534 chr7:66022727-66022746 chr7:66022519-66022529
17	GABPA	chr7:66022528-66023038	K562	blood:	n/a	n/a
18	POLR2A	chr7:66022925-66023371	K562	blood:	n/a	n/a
19	CTCF	chr7:66022151-66023325	SK-N-SH	brain:	n/a	chr7:66022519-66022532 chr7:66022726-66022744 chr7:66022517-66022535 chr7:66022728-66022749
20	POLR2A	chr7:66022716-66023156	HL-60	blood:	n/a	n/a
21	CCNT2	chr7:66022679-66023107	K562	blood:	n/a	chr7:66022861-66022870
22	MAZ	chr7:66022563-66023058	K562	blood:	n/a	chr7:66022977-66022987
23	THAP1	chr7:66022949-66023145	K562	blood:	n/a	n/a
24	RAD21	chr7:66022499-66023078	MCF-7	breast:	n/a	chr7:66022515-66022534 chr7:66022727-66022746 chr7:66022519-66022529
25	RAD21	chr7:66022434-66023047	H1-hESC	embryonic stem cell:	n/a	chr7:66022515-66022534 chr7:66022727-66022746 chr7:66022519-66022529
26	CTCF	chr7:66022992-66023055	GM12891	blood:	n/a	n/a
27	RAD21	chr7:66022483-66023075	HCT-116	colon:	n/a	chr7:66022515-66022534 chr7:66022727-66022746 chr7:66022519-66022529
28	CTCF	chr7:66022390-66023099	A549	lung:	n/a	chr7:66022519-66022532 chr7:66022726-66022744 chr7:66022517-66022535 chr7:66022728-66022749
29	RAD21	chr7:66022508-66023014	A549	lung:	n/a	chr7:66022515-66022534 chr7:66022727-66022746 chr7:66022519-66022529

No.	Distal block	Cell Line	Cell type
1	chr7:66021310..66024220-chr7:66204826..66206647,2	MCF-7	breast:
2	chr7:66022620..66023535-chr7:66071509..66072091,2	K562	blood:
3	chr7:66022427..66024519-chr7:66145511..66147231,2	MCF-7	breast:

Variant related genes	Relation type
ENSG00000177418	TF binding region
ENSG00000243335	Chromatin interaction
ENSG00000272831	Chromatin interaction
ENSG00000154710	Chromatin interaction

Extended variants
information (count: 117 )
Associated
traits (count: 20 )

rSNPs within LD-proxies of this variant (count:107)

rs_ID	r²[population]
rs10107	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs10265311	0.83[AFR][1000 genomes];0.86[AMR][1000 genomes];0.90[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs10271548	0.80[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs10274883	0.82[AFR][1000 genomes];0.92[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs10278014	0.88[AFR][1000 genomes];0.93[AMR][1000 genomes];0.97[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs10807704	0.83[AFR][1000 genomes]
rs10950043	0.86[AFR][1000 genomes];0.95[AMR][1000 genomes];0.94[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs10950046	0.84[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs11761542	0.87[EUR][1000 genomes]
rs11763189	0.85[AFR][1000 genomes];0.82[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs11765791	0.82[AFR][1000 genomes];0.81[AMR][1000 genomes];0.86[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs11772819	0.87[EUR][1000 genomes]
rs11772884	0.92[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs11773628	0.83[AFR][1000 genomes];0.82[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs12333370	0.80[AFR][1000 genomes];0.86[AMR][1000 genomes];0.94[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs12668005	0.85[AFR][1000 genomes];0.81[AMR][1000 genomes];0.80[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs12673450	0.91[AFR][1000 genomes];0.93[AMR][1000 genomes];0.98[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs12698522	0.85[AFR][1000 genomes];0.94[AMR][1000 genomes];0.87[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs12698526	0.85[AFR][1000 genomes];0.94[AMR][1000 genomes];0.88[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs13226170	0.93[AFR][1000 genomes];0.95[AMR][1000 genomes];0.95[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs13226966	0.87[EUR][1000 genomes]
rs13232191	0.88[AFR][1000 genomes];0.95[AMR][1000 genomes];0.94[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs13240501	0.93[AFR][1000 genomes];0.93[AMR][1000 genomes];0.94[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs13242290	0.81[AFR][1000 genomes];0.92[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs13308803	0.88[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs13536	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs1643375	0.80[AFR][1000 genomes]
rs17747530	0.92[AFR][1000 genomes];0.95[AMR][1000 genomes];0.94[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs1860469	0.81[AFR][1000 genomes];0.80[AMR][1000 genomes];0.94[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs1860472	0.83[AFR][1000 genomes];0.86[AMR][1000 genomes];0.94[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs1968126	0.90[AMR][1000 genomes];0.91[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs2013908	0.83[AFR][1000 genomes];0.92[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs2024192	0.90[AFR][1000 genomes];0.93[AMR][1000 genomes];0.96[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs2109295	0.86[AFR][1000 genomes];0.95[AMR][1000 genomes];0.93[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs2109297	0.82[AFR][1000 genomes];0.92[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs2420608	0.80[AFR][1000 genomes];0.82[EUR][1000 genomes]
rs2420610	0.95[AFR][1000 genomes];0.95[AMR][1000 genomes];0.94[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs2420611	0.93[AFR][1000 genomes];0.95[AMR][1000 genomes];0.95[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs2659890	0.88[EUR][1000 genomes]
rs2659891	0.88[EUR][1000 genomes]
rs2659892	0.88[EUR][1000 genomes]
rs2659893	0.88[EUR][1000 genomes]
rs2659896	0.87[EUR][1000 genomes]
rs2659898	0.88[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs2659901	0.88[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs2659907	0.90[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs2659908	0.90[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs2707824	0.88[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs2707837	0.87[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs2707847	0.88[EUR][1000 genomes]
rs28431318	0.82[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs28480509	0.80[AFR][1000 genomes];0.80[AMR][1000 genomes];0.92[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs28617601	0.80[AFR][1000 genomes];0.90[AMR][1000 genomes];0.85[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs28714531	0.85[AFR][1000 genomes];0.95[AMR][1000 genomes];0.88[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs28731376	0.98[AFR][1000 genomes];0.96[AMR][1000 genomes];0.95[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs2901209	0.83[AFR][1000 genomes];0.81[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs35378740	0.88[AFR][1000 genomes];0.95[AMR][1000 genomes];0.94[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs3846973	0.81[AFR][1000 genomes];0.92[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs3857685	0.82[AFR][1000 genomes];0.84[AMR][1000 genomes];0.86[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs3926380	0.80[AFR][1000 genomes];0.88[AMR][1000 genomes];0.94[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs4506088	0.86[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs4717315	0.88[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs4718377	0.88[AFR][1000 genomes];0.93[AMR][1000 genomes];0.97[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs4718383	0.81[AFR][1000 genomes];0.92[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs57739047	0.81[AFR][1000 genomes];0.82[AMR][1000 genomes];0.84[EUR][1000 genomes]
rs58347342	0.87[EUR][1000 genomes]
rs61348003	0.86[AFR][1000 genomes];0.90[AMR][1000 genomes];0.95[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs6460301	0.83[AFR][1000 genomes]
rs6460302	0.83[AFR][1000 genomes];0.83[EUR][1000 genomes]
rs6460303	0.85[AFR][1000 genomes];0.95[AMR][1000 genomes];0.88[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs6460304	0.83[AFR][1000 genomes];0.82[AMR][1000 genomes];0.84[EUR][1000 genomes]
rs66981195	0.83[AFR][1000 genomes];0.88[AMR][1000 genomes];0.93[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs6945775	0.83[AFR][1000 genomes]
rs6951302	0.81[AFR][1000 genomes];0.90[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs6951946	0.88[AFR][1000 genomes];0.93[AMR][1000 genomes];0.97[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs6955837	0.90[AFR][1000 genomes];0.93[AMR][1000 genomes];0.97[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs6958200	0.85[AFR][1000 genomes]
rs6971059	0.85[AFR][1000 genomes];0.93[AMR][1000 genomes];0.97[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs6973249	0.82[AMR][1000 genomes];0.83[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs6975044	0.83[EUR][1000 genomes]
rs6976714	0.80[AFR][1000 genomes]
rs6978028	0.80[AFR][1000 genomes];0.82[ASN][1000 genomes]
rs6978178	0.82[AFR][1000 genomes];0.92[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs6980451	0.82[EUR][1000 genomes]
rs721717	0.81[AFR][1000 genomes];0.86[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs7384021	0.87[AMR][1000 genomes];0.93[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs7385102	0.88[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs7778322	0.83[AFR][1000 genomes]
rs7782587	0.90[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs778697	0.80[AFR][1000 genomes]
rs7789615	0.80[AFR][1000 genomes]
rs7792762	0.85[AFR][1000 genomes]
rs7793723	0.84[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs7800620	0.87[EUR][1000 genomes]
rs7805152	0.86[EUR][1000 genomes]
rs7808013	0.82[AFR][1000 genomes];0.87[AMR][1000 genomes];0.94[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs801194	0.94[AFR][1000 genomes];0.93[AMR][1000 genomes];0.98[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs801195	0.96[AFR][1000 genomes];0.98[AMR][1000 genomes];0.99[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs801202	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs801204	0.92[AFR][1000 genomes];0.99[AMR][1000 genomes];1.00[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs801206	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs801208	0.99[AFR][1000 genomes];0.98[AMR][1000 genomes];0.98[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs801209	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs801215	0.80[AFR][1000 genomes];0.92[AMR][1000 genomes];0.86[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs881285	0.82[AFR][1000 genomes];0.91[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs9791712	0.81[AFR][1000 genomes];0.94[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs9791713	0.81[AFR][1000 genomes];0.80[AMR][1000 genomes];0.94[EUR][1000 genomes];0.88[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:10 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv532124	chr7:65371521-66234730	Enhancers Strong transcription Active TSS Weak transcription Flanking Active TSS Genic enhancers ZNF genes & repeats Bivalent/Poised TSS Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	125 gene(s)	inside rSNPs	diseases
2	nsv1026559	chr7:65617368-66370805	Weak transcription Enhancers Flanking Active TSS Strong transcription Active TSS ZNF genes & repeats Genic enhancers Bivalent/Poised TSS Bivalent Enhancer Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	116 gene(s)	inside rSNPs	diseases
3	nsv1035107	chr7:65814901-66114919	Genic enhancers Strong transcription ZNF genes & repeats Enhancers Weak transcription Bivalent Enhancer Active TSS Flanking Active TSS Bivalent/Poised TSS Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	69 gene(s)	inside rSNPs	diseases
4	nsv538909	chr7:65814901-66114919	Strong transcription Weak transcription Bivalent Enhancer Active TSS Enhancers Flanking Active TSS Genic enhancers Bivalent/Poised TSS Transcr. at gene 5' and 3' ZNF genes & repeats Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	69 gene(s)	inside rSNPs	diseases
5	nsv888326	chr7:65825257-66066999	Weak transcription Flanking Active TSS Strong transcription Enhancers Genic enhancers Active TSS ZNF genes & repeats Flanking Bivalent TSS/Enh Bivalent Enhancer Bivalent/Poised TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	41 gene(s)	inside rSNPs	diseases
6	nsv482441	chr7:65885824-66061788	Strong transcription Weak transcription Enhancers Genic enhancers Flanking Active TSS Bivalent/Poised TSS Active TSS Bivalent Enhancer Flanking Bivalent TSS/Enh ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	37 gene(s)	inside rSNPs	diseases
7	esv3447484	chr7:65909457-66033145	Weak transcription Flanking Active TSS Strong transcription Enhancers Active TSS Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Bivalent/Poised TSS Genic enhancers Bivalent Enhancer ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	29 gene(s)	inside rSNPs	diseases
8	esv3377926	chr7:65934493-66051484	Strong transcription Weak transcription Active TSS Flanking Active TSS Enhancers Genic enhancers Bivalent Enhancer Bivalent/Poised TSS ZNF genes & repeats Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	30 gene(s)	inside rSNPs	diseases
9	nsv888327	chr7:65938980-66029429	Active TSS Strong transcription Weak transcription Flanking Active TSS Enhancers Genic enhancers Bivalent/Poised TSS Bivalent Enhancer Flanking Bivalent TSS/Enh ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	29 gene(s)	inside rSNPs	diseases
10	esv3423847	chr7:65941210-66054107	Flanking Active TSS Weak transcription Strong transcription Active TSS Enhancers Genic enhancers Bivalent Enhancer Bivalent/Poised TSS ZNF genes & repeats Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	29 gene(s)	inside rSNPs	diseases

mRNA abundance (count:20)

SNP	Gene	Cis/trans	Tissue	Source
rs801203	RP4-756H11.3	cis	Artery Tibial	GTEx
rs801203	GS1-124K5.4	cis	Skin Sun Exposed Lower leg	GTEx
rs801203	RP4-756H11.3	cis	lung	GTEx
rs801203	RP4-756H11.3	cis	Skin Sun Exposed Lower leg	GTEx
rs801203	GS1-124K5.4	cis	Stomach	GTEx
rs801203	GS1-124K5.11	cis	Thyroid	GTEx
rs801203	RP4-756H11.3	cis	Thyroid	GTEx
rs801203	GS1-124K5.2	cis	Whole Blood	GTEx
rs801203	RP4-756H11.3	cis	Esophagus Mucosa	GTEx
rs801203	GS1-124K5.4	cis	Esophagus Mucosa	GTEx
rs801203	RP4-756H11.3	cis	Nerve Tibial	GTEx
rs801203	RP4-756H11.3	cis	Esophagus Muscularis	GTEx
rs801203	LINC00174	cis	Thyroid	GTEx
rs801203	ASL	Cis_1M	lymphoblastoid	RTeQTL
rs801203	RP4-756H11.3	cis	Muscle Skeletal	GTEx
rs801203	RP4-756H11.3	cis	Heart Left Ventricle	GTEx
rs801203	RNU6-96P	cis	Thyroid	GTEx
rs801203	GS1-124K5.4	cis	Artery Aorta	GTEx
rs801203	GTF2IRD1P1	cis	Thyroid	GTEx
rs801203	RP4-756H11.3	cis	Adipose Subcutaneous	GTEx

Chromatin state (count:126 , 50 per page) page: 1 2 3

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr7:66004400-66052600	Weak transcription	ES-WA7 Cell Line	embryonic stem cell
2	chr7:66004800-66037200	Weak transcription	Psoas Muscle	Psoas
3	chr7:66006200-66024400	Strong transcription	Fetal Muscle Leg	muscle
4	chr7:66006200-66024400	Strong transcription	Thymus	Thymus
5	chr7:66008600-66056000	Weak transcription	Pancreatic Islets	Pancreatic Islet
6	chr7:66009000-66031400	Strong transcription	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
7	chr7:66009200-66023600	Strong transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
8	chr7:66009200-66029400	Strong transcription	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
9	chr7:66011000-66037000	Weak transcription	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
10	chr7:66011600-66045000	Strong transcription	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
11	chr7:66012400-66024600	Strong transcription	Primary mononuclear cells fromperipheralblood	Blood
12	chr7:66012600-66024200	Strong transcription	Dnd41	blood
13	chr7:66013000-66031800	Strong transcription	Primary neutrophils fromperipheralblood	blood
14	chr7:66014400-66024400	Strong transcription	Fetal Brain Female	brain
15	chr7:66018000-66023200	Strong transcription	Foreskin Keratinocyte Primary Cells skin03	Skin
16	chr7:66018400-66029000	Weak transcription	Primary B cells from cord blood	blood
17	chr7:66019000-66023200	Weak transcription	HMEC	breast
18	chr7:66019400-66024000	Strong transcription	NHLF	lung
19	chr7:66019600-66023600	Weak transcription	GM12878-XiMat	blood
20	chr7:66019800-66025000	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
21	chr7:66019800-66036600	Weak transcription	HUVEC	blood vessel
22	chr7:66019800-66037400	Weak transcription	Rectal Smooth Muscle	rectum
23	chr7:66020000-66023600	Weak transcription	K562	blood
24	chr7:66020000-66025800	Weak transcription	iPS-18 Cell Line	embryonic stem cell
25	chr7:66020000-66025800	Weak transcription	HSMMtube	muscle
26	chr7:66020000-66029000	Weak transcription	HSMM	muscle
27	chr7:66020000-66030400	Weak transcription	Fetal Kidney	kidney
28	chr7:66020000-66031200	Weak transcription	Hela-S3	cervix
29	chr7:66020000-66036600	Weak transcription	H9 Cell Line	embryonic stem cell
30	chr7:66020000-66037400	Weak transcription	Small Intestine	intestine
31	chr7:66020400-66023600	Weak transcription	NHDF-Ad	bronchial
32	chr7:66020600-66023200	Weak transcription	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
33	chr7:66020600-66023200	Weak transcription	Primary T helper naive cells fromperipheralblood	blood
34	chr7:66020600-66023400	Weak transcription	Primary T cells from cord blood	blood
35	chr7:66020600-66023800	Weak transcription	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
36	chr7:66020600-66023800	Weak transcription	NH-A	brain
37	chr7:66020600-66030600	Weak transcription	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
38	chr7:66020600-66031200	Weak transcription	ES-I3 Cell Line	embryonic stem cell
39	chr7:66021000-66023600	Weak transcription	Rectal Mucosa Donor 29	rectum
40	chr7:66021000-66024200	Strong transcription	Placenta Amnion	Placenta Amnion
41	chr7:66021000-66026400	Strong transcription	Primary hematopoietic stem cells short term culture	blood
42	chr7:66021200-66024200	Strong transcription	iPS-15b Cell Line	embryonic stem cell
43	chr7:66021200-66024200	Genic enhancers	iPS DF 19.11 Cell Line	embryonic stem cell
44	chr7:66021200-66031200	Weak transcription	HUES64 Cell Line	embryonic stem cell
45	chr7:66021600-66024600	Strong transcription	Primary monocytes fromperipheralblood	blood
46	chr7:66021800-66024200	Strong transcription	Fetal Thymus	thymus
47	chr7:66021800-66025200	Strong transcription	Duodenum Mucosa	Duodenum
48	chr7:66021800-66056400	Weak transcription	iPS DF 6.9 Cell Line	embryonic stem cell
49	chr7:66022000-66023200	Weak transcription	Primary T regulatory cells fromperipheralblood	blood
50	chr7:66022000-66023200	Strong transcription	Right Atrium	heart

The 2.0 version of rSNPBase

Variant report

Quick Search:

what's new

Quick links