Variant report

Variant	rs9791713
Chromosome Location	chr7:66105198-66105199
allele	A/C
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type
1	chr7:66091949..66098427-chr7:66102890..66108956,6	K562	blood:
2	chr7:66104393..66107540-chr7:66116176..66121450,6	K562	blood:
3	chr7:66102739..66106974-chr7:66106983..66113666,6	K562	blood:
4	chr7:66104853..66106959-chr7:66112169..66114610,2	MCF-7	breast:
5	chr7:66092574..66099199-chr7:66101866..66108717,9	K562	blood:

Variant related genes	Relation type
ENSG00000243335	Chromatin interaction
ENSG00000226824	Chromatin interaction

Extended variants
information (count: 140 )
Associated
traits (count: 25 )

rSNPs within LD-proxies of this variant (count:129)

rs_ID	r²[population]
rs10107	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];0.81[AFR][1000 genomes];0.80[AMR][1000 genomes];0.94[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs10233806	0.89[CEU][hapmap];0.83[CHB][hapmap];0.94[YRI][hapmap];0.90[AFR][1000 genomes]
rs10244498	0.89[CEU][hapmap];0.83[CHB][hapmap];0.85[GIH][hapmap];0.83[MKK][hapmap];0.88[TSI][hapmap];0.94[YRI][hapmap];0.90[AFR][1000 genomes]
rs10265311	0.87[AFR][1000 genomes];0.80[AMR][1000 genomes];0.89[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs10271548	0.82[AMR][1000 genomes];0.86[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs10274883	0.99[AFR][1000 genomes];0.96[AMR][1000 genomes];0.98[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs10278014	1.00[ASW][hapmap];1.00[CEU][hapmap];1.00[CHB][hapmap];0.98[CHD][hapmap];0.98[GIH][hapmap];1.00[JPT][hapmap];1.00[LWK][hapmap];1.00[MEX][hapmap];1.00[MKK][hapmap];0.98[TSI][hapmap];1.00[YRI][hapmap];0.88[AFR][1000 genomes];0.87[AMR][1000 genomes];0.97[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs10281499	1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap]
rs10950043	0.80[AMR][1000 genomes];0.88[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs10950046	0.85[AFR][1000 genomes];0.86[AMR][1000 genomes];0.90[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs10950049	0.84[AFR][1000 genomes]
rs10950050	0.81[AFR][1000 genomes];0.81[AMR][1000 genomes];0.90[EUR][1000 genomes]
rs11761542	1.00[CEU][hapmap];0.95[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];0.88[AFR][1000 genomes];0.85[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs11763189	0.83[EUR][1000 genomes]
rs11765791	0.84[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs11772819	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.94[YRI][hapmap];0.92[AFR][1000 genomes];0.84[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs11772884	0.86[AMR][1000 genomes];0.86[EUR][1000 genomes]
rs11773628	0.83[EUR][1000 genomes]
rs12333370	0.94[AFR][1000 genomes];0.94[AMR][1000 genomes];1.00[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs12532998	0.89[CEU][hapmap];0.84[TSI][hapmap]
rs12668005	0.81[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs12673450	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];0.92[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs12698520	0.88[CEU][hapmap]
rs12698522	0.83[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs12698526	0.84[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs13226170	0.83[AFR][1000 genomes];0.80[AMR][1000 genomes];0.89[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs13226966	0.92[AFR][1000 genomes];0.84[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs13232191	0.80[AMR][1000 genomes];0.88[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs13240501	0.88[AFR][1000 genomes];0.87[AMR][1000 genomes];0.94[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs13242290	0.95[AFR][1000 genomes];0.96[AMR][1000 genomes];0.98[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs13308803	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];0.93[AFR][1000 genomes];0.89[AMR][1000 genomes];0.94[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs13536	1.00[ASW][hapmap];1.00[CEU][hapmap];1.00[CHB][hapmap];0.98[CHD][hapmap];0.98[GIH][hapmap];1.00[JPT][hapmap];1.00[LWK][hapmap];1.00[MEX][hapmap];1.00[MKK][hapmap];0.98[TSI][hapmap];1.00[YRI][hapmap];0.81[AFR][1000 genomes];0.80[AMR][1000 genomes];0.94[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs1544549	0.92[AFR][1000 genomes];0.81[AMR][1000 genomes];0.80[EUR][1000 genomes]
rs1623000	0.87[ASN][1000 genomes]
rs1638735	0.81[YRI][hapmap]
rs17747530	0.80[AMR][1000 genomes];0.88[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs1860469	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs1860472	0.98[AFR][1000 genomes];0.94[AMR][1000 genomes];1.00[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs1962050	0.89[CEU][hapmap];0.82[CHB][hapmap];0.81[GIH][hapmap];0.85[LWK][hapmap];0.88[TSI][hapmap]
rs1968126	0.83[AFR][1000 genomes];0.85[AMR][1000 genomes];0.92[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs2003300	0.94[YRI][hapmap];0.85[AFR][1000 genomes]
rs2013908	1.00[CEU][hapmap];0.95[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];0.98[AFR][1000 genomes];0.96[AMR][1000 genomes];0.98[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs2024192	0.90[AFR][1000 genomes];0.87[AMR][1000 genomes];0.95[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs2109295	0.87[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs2109297	0.89[ASW][hapmap];1.00[CEU][hapmap];1.00[CHB][hapmap];0.98[CHD][hapmap];0.95[GIH][hapmap];1.00[JPT][hapmap];1.00[LWK][hapmap];0.95[MEX][hapmap];1.00[MKK][hapmap];0.98[TSI][hapmap];1.00[YRI][hapmap];0.99[AFR][1000 genomes];0.96[AMR][1000 genomes];0.98[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs2420608	0.80[EUR][1000 genomes]
rs2420610	0.81[AFR][1000 genomes];0.80[AMR][1000 genomes];0.88[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs2420611	0.83[AFR][1000 genomes];0.80[AMR][1000 genomes];0.89[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs2420820	0.92[AFR][1000 genomes];0.81[AMR][1000 genomes];0.80[EUR][1000 genomes]
rs2420821	0.90[AMR][1000 genomes];0.84[EUR][1000 genomes]
rs2659890	0.89[AFR][1000 genomes];0.83[AMR][1000 genomes];0.94[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs2659891	0.94[AFR][1000 genomes];0.89[AMR][1000 genomes];0.94[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs2659892	0.95[CEU][hapmap];0.93[AFR][1000 genomes];0.89[AMR][1000 genomes];0.94[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs2659893	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];0.93[AFR][1000 genomes];0.89[AMR][1000 genomes];0.94[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs2659894	0.85[AFR][1000 genomes]
rs2659895	0.85[AFR][1000 genomes]
rs2659896	0.83[AFR][1000 genomes];0.88[AMR][1000 genomes];0.93[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs2659897	0.85[AFR][1000 genomes]
rs2659898	0.93[AFR][1000 genomes];0.89[AMR][1000 genomes];0.94[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs2659900	0.87[AFR][1000 genomes]
rs2659901	0.95[AFR][1000 genomes];0.88[AMR][1000 genomes];0.94[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs2659904	0.87[AFR][1000 genomes]
rs2659907	0.93[AFR][1000 genomes];0.96[AMR][1000 genomes];0.97[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs2659908	0.93[AFR][1000 genomes];0.96[AMR][1000 genomes];0.97[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs2707824	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];0.93[AFR][1000 genomes];0.89[AMR][1000 genomes];0.94[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs2707837	0.95[AFR][1000 genomes];0.88[AMR][1000 genomes];0.93[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs2707839	0.85[AFR][1000 genomes]
rs2707847	0.93[AFR][1000 genomes];0.85[AMR][1000 genomes];0.94[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs2707851	0.81[YRI][hapmap]
rs28431318	0.87[AMR][1000 genomes];0.88[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs28480509	0.99[AFR][1000 genomes];1.00[AMR][1000 genomes];0.98[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs28617601	0.81[EUR][1000 genomes]
rs28714531	0.80[AMR][1000 genomes];0.84[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs28731376	0.83[AFR][1000 genomes];0.81[AMR][1000 genomes];0.91[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs2901209	0.83[EUR][1000 genomes]
rs35378740	0.80[AMR][1000 genomes];0.88[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs3735148	0.89[CEU][hapmap];0.82[TSI][hapmap]
rs3778909	0.83[YRI][hapmap]
rs3846973	1.00[ASW][hapmap];1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];0.95[GIH][hapmap];1.00[JPT][hapmap];1.00[LWK][hapmap];0.95[MEX][hapmap];1.00[MKK][hapmap];0.98[TSI][hapmap];1.00[YRI][hapmap];0.95[AFR][1000 genomes];0.96[AMR][1000 genomes];0.98[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs3857685	0.84[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs3926380	0.94[AFR][1000 genomes];0.92[AMR][1000 genomes];1.00[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs4506088	0.93[AFR][1000 genomes];0.89[AMR][1000 genomes];0.92[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs4610622	0.84[AFR][1000 genomes]
rs4717315	0.90[AFR][1000 genomes];0.88[AMR][1000 genomes];0.94[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs4718377	0.88[AFR][1000 genomes];0.87[AMR][1000 genomes];0.97[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs4718383	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];1.00[AFR][1000 genomes];0.98[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs57739047	0.80[EUR][1000 genomes]
rs58347342	0.90[AFR][1000 genomes];0.88[AMR][1000 genomes];0.93[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs61348003	0.89[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs6460302	1.00[CEU][hapmap];0.94[YRI][hapmap];0.81[EUR][1000 genomes]
rs6460303	0.80[AMR][1000 genomes];0.84[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs6460304	1.00[CEU][hapmap];0.94[YRI][hapmap];0.80[EUR][1000 genomes]
rs6460307	0.89[ASW][hapmap];1.00[CEU][hapmap];0.95[CHB][hapmap];0.93[CHD][hapmap];0.98[GIH][hapmap];1.00[JPT][hapmap];1.00[LWK][hapmap];1.00[MEX][hapmap];1.00[MKK][hapmap];0.98[TSI][hapmap];1.00[YRI][hapmap]
rs66981195	0.98[AFR][1000 genomes];0.92[AMR][1000 genomes];0.99[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs6945019	0.89[CEU][hapmap]
rs6945032	0.89[CEU][hapmap]
rs6950137	1.00[CEU][hapmap];1.00[YRI][hapmap]
rs6951302	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];1.00[AFR][1000 genomes];0.95[AMR][1000 genomes];0.97[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs6951946	0.86[AFR][1000 genomes];0.87[AMR][1000 genomes];0.96[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs6955837	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];0.90[AFR][1000 genomes];0.87[AMR][1000 genomes];0.97[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs6958200	0.85[AFR][1000 genomes]
rs6969679	0.83[AFR][1000 genomes]
rs6971059	0.89[AFR][1000 genomes];0.87[AMR][1000 genomes];0.97[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs6973249	0.84[AFR][1000 genomes];0.95[AMR][1000 genomes];0.89[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs6975044	0.88[AFR][1000 genomes];0.81[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs6978178	0.99[AFR][1000 genomes];0.96[AMR][1000 genomes];0.98[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs6980451	0.81[EUR][1000 genomes]
rs721717	1.00[AFR][1000 genomes];0.94[AMR][1000 genomes];0.92[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs7384021	0.89[AFR][1000 genomes];0.90[AMR][1000 genomes];0.99[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs7385102	0.86[AFR][1000 genomes];0.89[AMR][1000 genomes];0.93[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs7782587	0.81[AFR][1000 genomes];0.95[AMR][1000 genomes];0.96[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs7789768	0.89[CEU][hapmap];0.84[TSI][hapmap]
rs7793723	0.88[AMR][1000 genomes];0.90[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs7800620	0.89[ASW][hapmap];0.87[CHB][hapmap];0.85[CHD][hapmap];0.93[GIH][hapmap];0.90[JPT][hapmap];1.00[LWK][hapmap];0.86[MEX][hapmap];0.94[MKK][hapmap];0.95[TSI][hapmap];0.94[YRI][hapmap];0.92[AFR][1000 genomes];0.84[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs7805152	0.85[AFR][1000 genomes];0.85[AMR][1000 genomes];0.92[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs7808013	0.92[AFR][1000 genomes];0.81[AMR][1000 genomes];0.98[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs801194	0.82[AFR][1000 genomes];0.87[AMR][1000 genomes];0.96[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs801195	0.89[ASW][hapmap];1.00[CEU][hapmap];1.00[CHB][hapmap];0.98[CHD][hapmap];0.98[GIH][hapmap];1.00[JPT][hapmap];0.96[LWK][hapmap];1.00[MEX][hapmap];1.00[MKK][hapmap];0.98[TSI][hapmap];1.00[YRI][hapmap];0.85[AFR][1000 genomes];0.82[AMR][1000 genomes];0.95[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs801202	0.81[AFR][1000 genomes];0.80[AMR][1000 genomes];0.94[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs801203	0.81[AFR][1000 genomes];0.80[AMR][1000 genomes];0.94[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs801204	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];0.94[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs801206	0.81[AFR][1000 genomes];0.80[AMR][1000 genomes];0.94[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs801208	0.80[AFR][1000 genomes];0.92[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs801209	0.81[AFR][1000 genomes];0.80[AMR][1000 genomes];0.94[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs801215	0.81[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs881285	0.96[AFR][1000 genomes];0.96[AMR][1000 genomes];0.97[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs964971	0.81[YRI][hapmap]
rs974239	0.89[CEU][hapmap];0.83[CHB][hapmap];0.85[GIH][hapmap];0.92[LWK][hapmap];0.83[MKK][hapmap];0.88[TSI][hapmap];0.94[YRI][hapmap];0.85[AFR][1000 genomes]
rs9791712	1.00[AFR][1000 genomes];0.98[AMR][1000 genomes];1.00[EUR][1000 genomes];0.99[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:11 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv532124	chr7:65371521-66234730	Enhancers Strong transcription Active TSS Weak transcription Flanking Active TSS Genic enhancers ZNF genes & repeats Bivalent/Poised TSS Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	125 gene(s)	inside rSNPs	diseases
2	nsv1026559	chr7:65617368-66370805	Weak transcription Enhancers Flanking Active TSS Strong transcription Active TSS ZNF genes & repeats Genic enhancers Bivalent/Poised TSS Bivalent Enhancer Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	116 gene(s)	inside rSNPs	diseases
3	nsv1035107	chr7:65814901-66114919	Genic enhancers Strong transcription ZNF genes & repeats Enhancers Weak transcription Bivalent Enhancer Active TSS Flanking Active TSS Bivalent/Poised TSS Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	69 gene(s)	inside rSNPs	diseases
4	nsv538909	chr7:65814901-66114919	Strong transcription Weak transcription Bivalent Enhancer Active TSS Enhancers Flanking Active TSS Genic enhancers Bivalent/Poised TSS Transcr. at gene 5' and 3' ZNF genes & repeats Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	69 gene(s)	inside rSNPs	diseases
5	esv2761151	chr7:66095738-66138285	Flanking Active TSS Strong transcription Genic enhancers Active TSS Weak transcription Enhancers Bivalent Enhancer Transcr. at gene 5' and 3' ZNF genes & repeats Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	22 gene(s)	inside rSNPs	diseases
6	esv3496297	chr7:66099491-66136579	Enhancers Flanking Active TSS Active TSS Strong transcription Weak transcription Genic enhancers ZNF genes & repeats Transcr. at gene 5' and 3' Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	22 gene(s)	inside rSNPs	diseases
7	esv3496298	chr7:66099491-66136579	Enhancers Strong transcription Flanking Active TSS Transcr. at gene 5' and 3' Weak transcription Genic enhancers Active TSS ZNF genes & repeats Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	22 gene(s)	inside rSNPs	diseases
8	esv3486481	chr7:66101377-66137773	Flanking Active TSS Enhancers Strong transcription Active TSS Weak transcription Genic enhancers Bivalent/Poised TSS ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	22 gene(s)	inside rSNPs	diseases
9	esv3486482	chr7:66101377-66137773	Flanking Active TSS Weak transcription Active TSS Enhancers ZNF genes & repeats Strong transcription Genic enhancers Transcr. at gene 5' and 3' Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	22 gene(s)	inside rSNPs	diseases
10	esv3509629	chr7:66101713-66137585	Active TSS Enhancers Strong transcription Weak transcription Flanking Active TSS Genic enhancers ZNF genes & repeats Bivalent/Poised TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	22 gene(s)	inside rSNPs	diseases
11	esv3509631	chr7:66101713-66137585	Weak transcription Enhancers Strong transcription Flanking Active TSS ZNF genes & repeats Active TSS Genic enhancers Transcr. at gene 5' and 3' Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	22 gene(s)	inside rSNPs	diseases

mRNA abundance (count:25)

SNP	Gene	Cis/trans	Tissue	Source
rs9791713	TPST1	cis	lymphoblastoid	seeQTL
rs9791713	ASL	Cis_1M	lymphoblastoid	RTeQTL
rs9791713	RABGEF1	cis	parietal	SCAN
rs9791713	RP4-756H11.3	cis	Thyroid	GTEx
rs9791713	RP4-756H11.3	cis	Heart Left Ventricle	GTEx
rs9791713	ZNF117	cis	parietal	SCAN
rs9791713	RP4-756H11.3	cis	Nerve Tibial	GTEx
rs9791713	RP4-756H11.3	cis	Artery Tibial	GTEx
rs9791713	GTF2IRD1P1	cis	Thyroid	GTEx
rs9791713	GS1-124K5.4	cis	Artery Aorta	GTEx
rs9791713	RP4-756H11.3	cis	lung	GTEx
rs9791713	GS1-124K5.4	cis	Stomach	GTEx
rs9791713	GS1-124K5.2	cis	Whole Blood	GTEx
rs9791713	LOC493754	cis	normal skin	skin_eQTL
rs9791713	LINC00174	cis	Thyroid	GTEx
rs9791713	GS1-124K5.4	cis	Esophagus Mucosa	GTEx
rs9791713	RP4-756H11.3	cis	Adipose Subcutaneous	GTEx
rs9791713	RP4-756H11.3	cis	Esophagus Muscularis	GTEx
rs9791713	RNU6-96P	cis	Thyroid	GTEx
rs9791713	GS1-124K5.4	cis	Skin Sun Exposed Lower leg	GTEx
rs9791713	RP4-756H11.3	cis	Muscle Skeletal	GTEx
rs9791713	RP4-756H11.3	cis	Esophagus Mucosa	GTEx
rs9791713	ASL	cis	cerebellum	SCAN
rs9791713	GS1-124K5.11	cis	Thyroid	GTEx
rs9791713	RP4-756H11.3	cis	Skin Sun Exposed Lower leg	GTEx

Chromatin state (count:122 , 50 per page) page: 1 2 3

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr7:66095000-66108800	Weak transcription	iPS DF 6.9 Cell Line	embryonic stem cell
2	chr7:66095000-66109000	Weak transcription	ES-WA7 Cell Line	embryonic stem cell
3	chr7:66095000-66115200	Weak transcription	HMEC	breast
4	chr7:66095200-66118400	Weak transcription	Fetal Heart	heart
5	chr7:66095200-66118400	Weak transcription	HUVEC	blood vessel
6	chr7:66096000-66113800	Strong transcription	Fetal Stomach	stomach
7	chr7:66097000-66113400	Strong transcription	Fetal Brain Female	brain
8	chr7:66097800-66118200	Weak transcription	Primary hematopoietic stem cells	blood
9	chr7:66098000-66109800	Strong transcription	Adipose Nuclei	Adipose
10	chr7:66098000-66111000	Strong transcription	H9 Derived Neuron Cultured Cells	ES cell derived
11	chr7:66098000-66111400	Strong transcription	Primary mononuclear cells fromperipheralblood	Blood
12	chr7:66098000-66112800	Strong transcription	Fetal Muscle Trunk	muscle
13	chr7:66098000-66113200	Strong transcription	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
14	chr7:66098000-66113400	Strong transcription	Breast Myoepithelial Primary Cells	Breast
15	chr7:66098200-66111200	Strong transcription	HUES6 Cell Line	embryonic stem cell
16	chr7:66098200-66112400	Strong transcription	Fetal Muscle Leg	muscle
17	chr7:66098400-66112200	Strong transcription	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
18	chr7:66098400-66113200	Strong transcription	Spleen	Spleen
19	chr7:66098600-66105800	Strong transcription	Liver	Liver
20	chr7:66098600-66109400	Strong transcription	Primary T helper naive cells fromperipheralblood	blood
21	chr7:66098800-66111200	Strong transcription	Primary T cells from cord blood	blood
22	chr7:66099400-66105200	Strong transcription	Primary T helper naive cells from peripheral blood	blood
23	chr7:66099400-66111200	Strong transcription	Primary T cells effector/memory enriched fromperipheralblood	blood
24	chr7:66099800-66113400	Strong transcription	Primary T regulatory cells fromperipheralblood	blood
25	chr7:66100000-66111200	Strong transcription	Primary T helper cells fromperipheralblood	blood
26	chr7:66100800-66108600	Strong transcription	Monocytes-CD14+_RO01746	blood
27	chr7:66101200-66111200	Strong transcription	Stomach Smooth Muscle	stomach
28	chr7:66101400-66105400	Strong transcription	Brain Angular Gyrus	brain
29	chr7:66101400-66106200	Strong transcription	Skeletal Muscle Female	skeletal muscle
30	chr7:66101400-66107000	Strong transcription	Primary B cells from peripheral blood	blood
31	chr7:66101400-66113400	Strong transcription	Primary T cells fromperipheralblood	blood
32	chr7:66101800-66113400	Strong transcription	Primary Natural Killer cells fromperipheralblood	blood
33	chr7:66102000-66106000	Strong transcription	Fetal Adrenal Gland	Adrenal Gland
34	chr7:66102000-66106200	Strong transcription	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
35	chr7:66102200-66105800	Strong transcription	Foreskin Melanocyte Primary Cells skin03	Skin
36	chr7:66102200-66106800	Strong transcription	Primary T killer memory cells from peripheral blood	blood
37	chr7:66102200-66109200	Strong transcription	Foreskin Keratinocyte Primary Cells skin03	Skin
38	chr7:66102200-66110800	Strong transcription	Primary neutrophils fromperipheralblood	blood
39	chr7:66102200-66112400	Strong transcription	Lung	lung
40	chr7:66102200-66113600	Strong transcription	IMR90 fetal lung fibroblasts Cell Line	lung
41	chr7:66102200-66113800	Strong transcription	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
42	chr7:66102400-66106200	Strong transcription	Skeletal Muscle Male	skeletal muscle
43	chr7:66102400-66106600	Strong transcription	Fetal Thymus	thymus
44	chr7:66102400-66107200	Strong transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
45	chr7:66102400-66109400	Strong transcription	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
46	chr7:66102400-66112400	Strong transcription	Placenta	Placenta
47	chr7:66102400-66113400	Strong transcription	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
48	chr7:66102400-66113400	Strong transcription	Brain Germinal Matrix	brain
49	chr7:66102600-66105400	Strong transcription	Brain Inferior Temporal Lobe	brain
50	chr7:66102600-66108000	Strong transcription	Primary T helper memory cells from peripheral blood 1	blood

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