Variant report

Variant	rs8014673
Chromosome Location	chr14:35045375-35045376
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr14:35022324..35025884-chr14:35039151..35046276,8	MCF-7	breast:
2	chr14:35045361..35048103-chr14:35051745..35053672,2	K562	blood:

Variant related genes	Relation type
ENSG00000206588	Chromatin interaction

Extended variants
information (count: 32 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:25)

rs_ID	r²[population]
rs10129588	0.89[AFR][1000 genomes];0.91[AMR][1000 genomes];0.87[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs10130504	0.91[AFR][1000 genomes];0.88[AMR][1000 genomes];0.93[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs10134991	0.97[AFR][1000 genomes];0.97[AMR][1000 genomes];0.98[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs10151653	0.92[AFR][1000 genomes];0.87[AMR][1000 genomes];0.86[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs10431614	0.81[AMR][1000 genomes];0.89[ASN][1000 genomes]
rs11156848	0.96[ASN][1000 genomes]
rs11622002	0.88[AFR][1000 genomes];0.86[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs11850430	0.84[ASN][1000 genomes]
rs12431530	0.81[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs12879294	1.00[ASN][1000 genomes]
rs12881595	1.00[ASN][1000 genomes]
rs34755567	0.92[AFR][1000 genomes];0.91[AMR][1000 genomes];0.85[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs34939235	0.94[ASN][1000 genomes]
rs35239119	0.96[ASN][1000 genomes]
rs3958	0.94[ASN][1000 genomes]
rs4312221	0.96[ASN][1000 genomes]
rs4347522	0.84[ASN][1000 genomes]
rs61553463	0.81[AFR][1000 genomes];0.81[AMR][1000 genomes];0.89[ASN][1000 genomes]
rs61979724	0.81[AFR][1000 genomes];0.89[ASN][1000 genomes]
rs6571665	0.89[AFR][1000 genomes];0.88[AMR][1000 genomes];0.94[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs6650498	0.81[AMR][1000 genomes];0.89[ASN][1000 genomes]
rs7153918	0.94[AFR][1000 genomes];0.88[AMR][1000 genomes];0.86[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7157392	0.88[AFR][1000 genomes];0.88[AMR][1000 genomes];0.94[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs7161203	0.89[ASN][1000 genomes]
rs8021267	0.86[AMR][1000 genomes];0.86[EUR][1000 genomes];1.00[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:7 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1040980	chr14:34345018-35255592	Strong transcription Weak transcription Flanking Active TSS Flanking Bivalent TSS/Enh Enhancers Bivalent Enhancer Active TSS Genic enhancers Transcr. at gene 5' and 3' Bivalent/Poised TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	109 gene(s)	inside rSNPs	diseases
2	nsv1048408	chr14:34958352-35255592	Weak transcription Strong transcription Flanking Active TSS Active TSS Enhancers Bivalent Enhancer Genic enhancers Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Bivalent/Poised TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	63 gene(s)	inside rSNPs	diseases
3	nsv1049048	chr14:34969406-35048672	Enhancers Strong transcription Weak transcription Genic enhancers Flanking Active TSS Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS ZNF genes & repeats Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	48 gene(s)	inside rSNPs	diseases
4	esv3392700	chr14:34989406-35365530	Enhancers Genic enhancers Weak transcription Strong transcription Flanking Active TSS Active TSS ZNF genes & repeats Flanking Bivalent TSS/Enh Bivalent/Poised TSS Bivalent Enhancer Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	85 gene(s)	inside rSNPs	diseases
5	nsv1040303	chr14:35040853-35101044	Enhancers Strong transcription Weak transcription Flanking Active TSS Active TSS Genic enhancers Transcr. at gene 5' and 3' Bivalent/Poised TSS Flanking Bivalent TSS/Enh ZNF genes & repeats Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	16 gene(s)	inside rSNPs	diseases
6	nsv542027	chr14:35040853-35101044	Weak transcription Strong transcription Active TSS Enhancers Flanking Active TSS Genic enhancers Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' ZNF genes & repeats Bivalent/Poised TSS Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	16 gene(s)	inside rSNPs	diseases
7	nsv1038360	chr14:35040853-35152886	Strong transcription Weak transcription Enhancers Genic enhancers Active TSS Flanking Active TSS Bivalent/Poised TSS Transcr. at gene 5' and 3' Bivalent Enhancer ZNF genes & repeats Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	21 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:125 , 50 per page) page: 1 2 3

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr14:35024200-35046200	Weak transcription	Primary T killer memory cells from peripheral blood	blood
2	chr14:35024400-35053600	Weak transcription	iPS-15b Cell Line	embryonic stem cell
3	chr14:35024400-35056800	Weak transcription	Small Intestine	intestine
4	chr14:35024400-35060600	Weak transcription	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
5	chr14:35024400-35066200	Weak transcription	Stomach Mucosa	stomach
6	chr14:35031400-35047400	Strong transcription	Foreskin Keratinocyte Primary Cells skin03	Skin
7	chr14:35031400-35052600	Strong transcription	Fetal Adrenal Gland	Adrenal Gland
8	chr14:35031400-35073400	Strong transcription	Primary monocytes fromperipheralblood	blood
9	chr14:35031400-35073400	Strong transcription	Monocytes-CD14+_RO01746	blood
10	chr14:35031400-35078000	Strong transcription	Primary B cells from peripheral blood	blood
11	chr14:35031600-35047200	Strong transcription	Primary hematopoietic stem cells G-CSF-mobilized Female	--
12	chr14:35031600-35049800	Strong transcription	Osteobl	bone
13	chr14:35031600-35050600	Strong transcription	H9 Derived Neuron Cultured Cells	ES cell derived
14	chr14:35031600-35055800	Strong transcription	Liver	Liver
15	chr14:35031600-35059600	Strong transcription	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
16	chr14:35031600-35074000	Strong transcription	Primary neutrophils fromperipheralblood	blood
17	chr14:35031600-35074000	Strong transcription	Primary hematopoietic stem cells G-CSF-mobilized Male	--
18	chr14:35031600-35079400	Strong transcription	Primary T regulatory cells fromperipheralblood	blood
19	chr14:35031800-35063400	Strong transcription	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
20	chr14:35032000-35056000	Strong transcription	Fetal Thymus	thymus
21	chr14:35032000-35072600	Strong transcription	Fetal Intestine Small	intestine
22	chr14:35032000-35072600	Strong transcription	Fetal Stomach	stomach
23	chr14:35032000-35078200	Strong transcription	Fetal Muscle Trunk	muscle
24	chr14:35032000-35078600	Strong transcription	Primary mononuclear cells fromperipheralblood	Blood
25	chr14:35032200-35061600	Weak transcription	Fetal Heart	heart
26	chr14:35032200-35080600	Strong transcription	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
27	chr14:35032400-35055000	Weak transcription	iPS DF 6.9 Cell Line	embryonic stem cell
28	chr14:35033000-35045400	Strong transcription	Primary T helper 17 cells PMA-I stimulated	--
29	chr14:35033000-35079000	Strong transcription	HepG2	liver
30	chr14:35033200-35061600	Weak transcription	Psoas Muscle	Psoas
31	chr14:35034800-35047400	Strong transcription	HUES6 Cell Line	embryonic stem cell
32	chr14:35035600-35051400	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
33	chr14:35035600-35053400	Weak transcription	Fetal Brain Male	brain
34	chr14:35036200-35048400	Weak transcription	Primary hematopoietic stem cells	blood
35	chr14:35036400-35059200	Weak transcription	Pancreatic Islets	Pancreatic Islet
36	chr14:35036800-35050200	Weak transcription	HSMMtube	muscle
37	chr14:35038400-35046600	Weak transcription	Brain Inferior Temporal Lobe	brain
38	chr14:35038400-35049200	Weak transcription	Aorta	Aorta
39	chr14:35038600-35051600	Weak transcription	NHLF	lung
40	chr14:35039000-35048600	Weak transcription	H9 Cell Line	embryonic stem cell
41	chr14:35039200-35046600	Weak transcription	NHEK	skin
42	chr14:35039200-35054200	Weak transcription	Fetal Kidney	kidney
43	chr14:35039800-35046400	Weak transcription	Brain Cingulate Gyrus	brain
44	chr14:35040600-35080400	Strong transcription	Duodenum Mucosa	Duodenum
45	chr14:35040800-35054200	Weak transcription	ES-I3 Cell Line	embryonic stem cell
46	chr14:35041200-35073400	Weak transcription	K562	blood
47	chr14:35041400-35046200	Weak transcription	Brain Dorsolateral Prefrontal Cortex	brain
48	chr14:35041600-35048600	Weak transcription	Primary B cells from cord blood	blood
49	chr14:35041600-35080200	Weak transcription	ES-WA7 Cell Line	embryonic stem cell
50	chr14:35041800-35046600	Weak transcription	NHDF-Ad	bronchial

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