Variant report

Variant	rs8017345
Chromosome Location	chr14:106115061-106115062
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 12 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:11)

rs_ID	r²[population]
rs56101908	1.00[EUR][1000 genomes]
rs56178366	1.00[EUR][1000 genomes]
rs58220312	1.00[EUR][1000 genomes]
rs60886668	1.00[EUR][1000 genomes]
rs61737468	1.00[EUR][1000 genomes]
rs7150801	1.00[EUR][1000 genomes]
rs74091270	1.00[EUR][1000 genomes]
rs74091956	1.00[EUR][1000 genomes]
rs74091958	1.00[EUR][1000 genomes]
rs8010601	1.00[EUR][1000 genomes]
rs8020782	1.00[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv530813	chr14:105607701-106453697	Strong transcription Weak transcription Active TSS Bivalent Enhancer ZNF genes & repeats Genic enhancers Flanking Active TSS Enhancers Flanking Bivalent TSS/Enh Bivalent/Poised TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	149 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:11 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr14:106107800-106116800	Weak transcription	Pancreas	Pancrea
2	chr14:106112400-106115200	Enhancers	Liver	Liver
3	chr14:106112600-106116000	ZNF genes & repeats	iPS DF 19.11 Cell Line	embryonic stem cell
4	chr14:106112600-106116800	ZNF genes & repeats	ES-UCSF4 Cell Line	embryonic stem cell
5	chr14:106112800-106116000	Enhancers	Primary B cells from cord blood	blood
6	chr14:106114400-106115600	Enhancers	GM12878-XiMat	blood
7	chr14:106114400-106115800	ZNF genes & repeats	iPS-15b Cell Line	embryonic stem cell
8	chr14:106114600-106115200	Bivalent Enhancer	Primary T cells fromperipheralblood	blood
9	chr14:106114600-106115400	Bivalent Enhancer	Breast Myoepithelial Primary Cells	Breast
10	chr14:106114800-106115200	Active TSS	Primary Natural Killer cells fromperipheralblood	blood
11	chr14:106114800-106116200	Flanking Active TSS	Primary B cells from peripheral blood	blood

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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