Variant report
| Variant | rs8018778 |
|---|---|
| Chromosome Location | chr14:32666029-32666030 |
| allele | A/G |
| Outlinks | Ensembl UCSC |
- TF binding region (count:0)
- CpG islands (count:0)
- Chromatin interactive region (count:2)
- LncRNA region (count:0)
- Mature miRNA region (count: 0)
- miRNA target sites (count:0)
| No data |
| No data |
(count:2 , 50 per page) page:
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| No data |
| No data |
| No data |
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rSNPs within LD-proxies of this variant (count:37)
| rs_ID | r2[population] |
|---|---|
| rs10130218 | 0.88[ASN][1000 genomes] |
| rs10136523 | 0.93[ASN][1000 genomes] |
| rs10137315 | 0.91[ASN][1000 genomes] |
| rs10138295 | 0.90[ASN][1000 genomes] |
| rs10138397 | 0.90[ASN][1000 genomes] |
| rs10139123 | 0.92[ASN][1000 genomes] |
| rs10140813 | 0.89[ASN][1000 genomes] |
| rs10141044 | 0.88[ASN][1000 genomes] |
| rs10141207 | 0.88[ASN][1000 genomes] |
| rs10144755 | 0.90[ASN][1000 genomes] |
| rs10872859 | 0.90[ASN][1000 genomes] |
| rs11845870 | 0.92[ASN][1000 genomes] |
| rs11848180 | 0.84[AFR][1000 genomes];0.90[AMR][1000 genomes];0.93[EUR][1000 genomes];0.96[ASN][1000 genomes] |
| rs12878800 | 0.92[ASN][1000 genomes] |
| rs17098553 | 0.95[ASN][1000 genomes] |
| rs17098598 | 0.88[ASN][1000 genomes] |
| rs1958367 | 0.95[ASN][1000 genomes] |
| rs1958368 | 0.94[ASN][1000 genomes] |
| rs2149665 | 0.92[ASN][1000 genomes] |
| rs5002692 | 0.84[AMR][1000 genomes];0.90[ASN][1000 genomes] |
| rs7160720 | 0.92[ASN][1000 genomes] |
| rs7160938 | 0.92[ASN][1000 genomes] |
| rs8003494 | 0.92[ASN][1000 genomes] |
| rs8003504 | 0.92[ASN][1000 genomes] |
| rs8005822 | 0.92[ASN][1000 genomes] |
| rs8005842 | 0.92[ASN][1000 genomes] |
| rs8006035 | 0.81[AMR][1000 genomes];0.83[EUR][1000 genomes];0.98[ASN][1000 genomes] |
| rs8006774 | 0.92[ASN][1000 genomes] |
| rs8011428 | 0.89[ASN][1000 genomes] |
| rs8013618 | 0.89[ASN][1000 genomes] |
| rs8013984 | 0.90[ASN][1000 genomes] |
| rs8016252 | 0.88[ASN][1000 genomes] |
| rs8017486 | 0.92[ASN][1000 genomes] |
| rs8017665 | 0.88[ASN][1000 genomes] |
| rs8020915 | 0.89[ASN][1000 genomes] |
| rs8020976 | 0.92[ASN][1000 genomes] |
| rs8022007 | 0.89[ASN][1000 genomes] |
Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page:
1
| No. | Variant name | Chromosome position | Chromatin state | Related regulatory elements | Target genes | Extended variants | Associated traits |
|---|---|---|---|---|---|---|---|
| 1 | nsv832764 | chr14:32564468-32723213 | Active TSS Weak transcription Enhancers ZNF genes & repeats Strong transcription Genic enhancers Flanking Active TSS Flanking Bivalent TSS/Enh Bivalent/Poised TSS Bivalent Enhancer Transcr. at gene 5' and 3' | TF binding regionCpG islandChromatin interactive regionlncRNAmiRNA target site | 8 gene(s) | inside rSNPs | diseases |
| No data |
| No. | Chromosome Location | Chromatin state | Cell line | Tissue |
|---|---|---|---|---|
| 1 | chr14:32660200-32669000 | Weak transcription | Primary B cells from peripheral blood | blood |
