Variant report

Variant	rs8021423
Chromosome Location	chr14:81595369-81595370
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 20 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:17)

rs_ID	r²[population]
rs12586613	0.89[ASN][1000 genomes]
rs2888050	0.97[ASN][1000 genomes]
rs35080161	0.86[ASN][1000 genomes]
rs57548236	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs59334515	1.00[ASN][1000 genomes]
rs59395915	0.89[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs60832047	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs6574629	0.99[ASN][1000 genomes]
rs66996522	0.99[ASN][1000 genomes]
rs67045633	0.99[ASN][1000 genomes]
rs67915209	1.00[ASN][1000 genomes]
rs7144198	0.99[ASN][1000 genomes]
rs7158881	0.86[AMR][1000 genomes];0.97[EUR][1000 genomes]
rs72691609	1.00[ASN][1000 genomes]
rs72691624	1.00[ASN][1000 genomes]
rs8022675	0.86[AMR][1000 genomes];0.98[EUR][1000 genomes]
rs9652304	0.86[AMR][1000 genomes];0.97[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:3 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1052999	chr14:81468860-81599074	Weak transcription Strong transcription Flanking Active TSS Enhancers Active TSS ZNF genes & repeats Bivalent Enhancer Genic enhancers Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	5 gene(s)	inside rSNPs	diseases
2	nsv542144	chr14:81468860-81599074	Enhancers Weak transcription Strong transcription Active TSS Flanking Active TSS Bivalent/Poised TSS ZNF genes & repeats Genic enhancers Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	5 gene(s)	inside rSNPs	diseases
3	nsv832841	chr14:81588322-81743921	Flanking Active TSS Weak transcription Strong transcription Active TSS Enhancers ZNF genes & repeats Genic enhancers Transcr. at gene 5' and 3' Bivalent Enhancer Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	86 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:4 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr14:81592200-81597800	Weak transcription	Liver	Liver
2	chr14:81592200-81609000	Weak transcription	Thymus	Thymus
3	chr14:81592400-81601000	Weak transcription	Dnd41	blood
4	chr14:81594600-81596000	Enhancers	Monocytes-CD14+_RO01746	blood

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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